Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   JCR30_RS09065 Genome accession   NZ_CP067008
Coordinates   1800481..1801194 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain iGAS426     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1795481..1806194
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JCR30_RS09055 (JCR30_09055) treC 1796551..1798179 (-) 1629 WP_011889217.1 alpha,alpha-phosphotrehalase -
  JCR30_RS09060 (JCR30_09060) treP 1798246..1800270 (-) 2025 WP_011889218.1 PTS system trehalose-specific EIIBC component -
  JCR30_RS09065 (JCR30_09065) treR 1800481..1801194 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  JCR30_RS09070 (JCR30_09070) - 1801473..1801799 (-) 327 WP_011185054.1 helix-turn-helix domain-containing protein -
  JCR30_RS09075 (JCR30_09075) - 1801985..1802833 (+) 849 Protein_1743 VOC family protein -
  JCR30_RS09080 (JCR30_09080) yaaA 1802875..1803606 (+) 732 WP_011889219.1 peroxide stress protein YaaA -
  JCR30_RS09085 (JCR30_09085) nrdG 1803780..1804394 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  JCR30_RS09090 (JCR30_09090) - 1804394..1804903 (-) 510 WP_002991345.1 GNAT family N-acetyltransferase -
  JCR30_RS09095 (JCR30_09095) - 1804912..1805847 (-) 936 WP_011889220.1 Gfo/Idh/MocA family oxidoreductase -
  JCR30_RS09100 (JCR30_09100) - 1805876..1806022 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=524249 JCR30_RS09065 WP_002982243.1 1800481..1801194(+) (treR) [Streptococcus pyogenes strain iGAS426]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=524249 JCR30_RS09065 WP_002982243.1 1800481..1801194(+) (treR) [Streptococcus pyogenes strain iGAS426]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTTTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679