Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   JCR30_RS07620 Genome accession   NZ_CP067008
Coordinates   1481192..1481917 (-) Length   241 a.a.
NCBI ID   WP_011888644.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain iGAS426     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1476192..1486917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JCR30_RS07585 (JCR30_07585) - 1476226..1476522 (-) 297 WP_002983486.1 YlxR family protein -
  JCR30_RS07590 (JCR30_07590) nusA 1476538..1477695 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  JCR30_RS07595 (JCR30_07595) rimP 1477870..1478406 (-) 537 WP_011888645.1 ribosome maturation factor RimP -
  JCR30_RS07605 (JCR30_07605) trmB 1478665..1479300 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  JCR30_RS07610 (JCR30_07610) - 1479300..1480091 (-) 792 WP_002983385.1 phosphotransferase family protein -
  JCR30_RS07615 (JCR30_07615) - 1480155..1481189 (-) 1035 WP_002994331.1 ABC transporter permease -
  JCR30_RS07620 (JCR30_07620) pptA 1481192..1481917 (-) 726 WP_011888644.1 ABC transporter ATP-binding protein Regulator
  JCR30_RS07625 (JCR30_07625) - 1481989..1482408 (+) 420 WP_002983376.1 HIT family protein -
  JCR30_RS07630 (JCR30_07630) - 1482405..1482761 (+) 357 WP_011888643.1 hypothetical protein -
  JCR30_RS07635 (JCR30_07635) - 1482872..1484155 (-) 1284 WP_002983372.1 LCP family protein -
  JCR30_RS07640 (JCR30_07640) - 1484164..1484688 (-) 525 WP_011888642.1 N-acetyltransferase -
  JCR30_RS07645 (JCR30_07645) tsaE 1484663..1485124 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  JCR30_RS07650 (JCR30_07650) - 1485278..1486738 (-) 1461 WP_002983366.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26650.69 Da        Isoelectric Point: 4.5624

>NTDB_id=524243 JCR30_RS07620 WP_011888644.1 1481192..1481917(-) (pptA) [Streptococcus pyogenes strain iGAS426]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEAEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=524243 JCR30_RS07620 WP_011888644.1 1481192..1481917(-) (pptA) [Streptococcus pyogenes strain iGAS426]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGCCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714