Detailed information NTG0523936

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: J6O11_RS00980
• Genome accession: NZ_CP081774
• Coordinates: 203809..204792 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 0H24
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 198809..209792

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6O11_RS00965 (J6O11_00955)	dppA	200109..201716 (+)	1608	WP_001222881.1	dipeptide ABC transporter substrate-binding protein DppA	-
J6O11_RS00970 (J6O11_00960)	dppB	201867..202886 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
J6O11_RS00975 (J6O11_00965)	dppC	202896..203798 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
J6O11_RS00980 (J6O11_00970)	amiE	203809..204792 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
J6O11_RS00985 (J6O11_00975)	dppF	204789..205793 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
J6O11_RS00990 (J6O11_00980)	yhjV	205823..207094 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
J6O11_RS00995 (J6O11_00985)	-	207570..207677 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
J6O11_RS01000 (J6O11_00990)	-	208053..208160 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
J6O11_RS01005 (J6O11_00995)	-	208536..208643 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
J6O11_RS01010 (J6O11_01000)	-	209019..209126 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=523936 J6O11_RS00980 WP_001196486.1 203809..204792(+) (amiE) [Escherichia coli strain 0H24]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=523936 J6O11_RS00980 WP_001196486.1 203809..204792(+) (amiE) [Escherichia coli strain 0H24]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404