Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JH274_RS05665 Genome accession   NZ_CP066968
Coordinates   1335440..1335841 (+) Length   133 a.a.
NCBI ID   WP_011038048.1    Uniprot ID   Q8P6P2
Organism   Xanthomonas campestris pv. incanae strain 16-8     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1330440..1340841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JH274_RS05645 (JH274_05635) tsaB 1331532..1332251 (+) 720 WP_274390714.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  JH274_RS05650 (JH274_05640) - 1332251..1333174 (+) 924 WP_274396016.1 ADP-ribosylglycohydrolase family protein -
  JH274_RS05655 (JH274_05645) - 1333380..1334255 (-) 876 WP_223646219.1 energy transducer TonB -
  JH274_RS05660 (JH274_05650) gshB 1334252..1335202 (-) 951 WP_274390712.1 glutathione synthase -
  JH274_RS05665 (JH274_05655) pilG 1335440..1335841 (+) 402 WP_011038048.1 twitching motility response regulator PilG Regulator
  JH274_RS05670 (JH274_05660) - 1335859..1336221 (+) 363 WP_011038047.1 response regulator -
  JH274_RS05675 (JH274_05665) - 1336221..1336751 (+) 531 WP_014508568.1 chemotaxis protein CheW -
  JH274_RS05680 (JH274_05670) - 1336791..1338827 (+) 2037 WP_011038045.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14676.05 Da        Isoelectric Point: 6.3482

>NTDB_id=523681 JH274_RS05665 WP_011038048.1 1335440..1335841(+) (pilG) [Xanthomonas campestris pv. incanae strain 16-8]
MTENMAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=523681 JH274_RS05665 WP_011038048.1 1335440..1335841(+) (pilG) [Xanthomonas campestris pv. incanae strain 16-8]
ATGACTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTTATCGATGATTCGAAGACCATTCGCCG
CACTGCCGAAACGCTGCTCAAGCGCGAAGGCTGTGAAGTGGTGACAGCGACGGACGGATTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTGGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCTTCCAAGGATGGCCTGTTTGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACCCGTGAAGAACTACTGAGCGCGATCCGTACGTACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8P6P2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684