Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JH262_RS16095 Genome accession   NZ_CP066961
Coordinates   3615458..3615859 (-) Length   133 a.a.
NCBI ID   WP_011038048.1    Uniprot ID   Q8P6P2
Organism   Xanthomonas campestris pv. incanae strain 5057     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3610458..3620859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JH262_RS16080 (JH262_16020) - 3612472..3614508 (-) 2037 WP_011038045.1 methyl-accepting chemotaxis protein -
  JH262_RS16085 (JH262_16025) - 3614548..3615078 (-) 531 WP_014508568.1 chemotaxis protein CheW -
  JH262_RS16090 (JH262_16030) - 3615078..3615440 (-) 363 WP_011038047.1 response regulator -
  JH262_RS16095 (JH262_16035) pilG 3615458..3615859 (-) 402 WP_011038048.1 twitching motility response regulator PilG Regulator
  JH262_RS16100 (JH262_16040) gshB 3616097..3617047 (+) 951 WP_274392582.1 glutathione synthase -
  JH262_RS16105 (JH262_16045) - 3617044..3617919 (+) 876 WP_223646219.1 energy transducer TonB -
  JH262_RS16110 (JH262_16050) - 3618125..3619048 (-) 924 WP_274392583.1 ADP-ribosylglycohydrolase family protein -
  JH262_RS16115 (JH262_16055) tsaB 3619048..3619767 (-) 720 WP_223646228.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14676.05 Da        Isoelectric Point: 6.3482

>NTDB_id=523632 JH262_RS16095 WP_011038048.1 3615458..3615859(-) (pilG) [Xanthomonas campestris pv. incanae strain 5057]
MTENMAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=523632 JH262_RS16095 WP_011038048.1 3615458..3615859(-) (pilG) [Xanthomonas campestris pv. incanae strain 5057]
ATGACTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTTATCGATGATTCGAAGACCATTCGCCG
CACTGCCGAAACGCTGCTCAAGCGCGAAGGCTGTGAAGTGGTGACAGCGACGGACGGATTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTGGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCTTCCAAGGATGGCCTGTTTGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACCCGTGAAGAACTACTGAGCGCGATCCGTACGTACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8P6P2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684