Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JH260_RS15335 Genome accession   NZ_CP066959
Coordinates   3478216..3478617 (-) Length   133 a.a.
NCBI ID   WP_011038048.1    Uniprot ID   Q8P6P2
Organism   Xanthomonas campestris pv. incanae strain 4053     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3473216..3483617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JH260_RS15320 (JH260_15290) - 3475230..3477266 (-) 2037 WP_011038045.1 methyl-accepting chemotaxis protein -
  JH260_RS15325 (JH260_15295) - 3477306..3477836 (-) 531 WP_014508568.1 chemotaxis protein CheW -
  JH260_RS15330 (JH260_15300) - 3477836..3478198 (-) 363 WP_011038047.1 PleD family two-component system response regulator -
  JH260_RS15335 (JH260_15305) pilG 3478216..3478617 (-) 402 WP_011038048.1 twitching motility response regulator PilG Regulator
  JH260_RS15340 (JH260_15310) gshB 3478855..3479805 (+) 951 WP_012437703.1 glutathione synthase -
  JH260_RS15345 (JH260_15315) - 3479802..3480677 (+) 876 WP_228957197.1 energy transducer TonB -
  JH260_RS15350 (JH260_15320) - 3480898..3481821 (-) 924 WP_274394293.1 ADP-ribosylglycohydrolase family protein -
  JH260_RS15355 (JH260_15325) tsaB 3481821..3482540 (-) 720 WP_223646228.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14676.05 Da        Isoelectric Point: 6.3482

>NTDB_id=523615 JH260_RS15335 WP_011038048.1 3478216..3478617(-) (pilG) [Xanthomonas campestris pv. incanae strain 4053]
MTENMAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=523615 JH260_RS15335 WP_011038048.1 3478216..3478617(-) (pilG) [Xanthomonas campestris pv. incanae strain 4053]
ATGACTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTTATCGATGATTCGAAGACCATTCGCCG
CACTGCCGAAACGCTGCTCAAGCGCGAAGGCTGTGAAGTGGTGACAGCGACGGACGGATTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTGGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCTTCCAAGGATGGCCTGTTTGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACCCGTGAAGAACTACTGAGCGCGATCCGTACGTACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8P6P2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684