Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ECENHK_RS08040 Genome accession   NC_018405
Coordinates   1713761..1714387 (+) Length   208 a.a.
NCBI ID   WP_014883254.1    Uniprot ID   A0A2W0GP96
Organism   Enterobacter kobei     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1708761..1719387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ECENHK_RS08020 (ECENHK_07830) - 1709159..1710919 (-) 1761 WP_014883250.1 Lon protease family protein -
  ECENHK_RS08025 (ECENHK_07835) matP 1711106..1711559 (+) 454 Protein_1567 macrodomain Ter protein MatP -
  ECENHK_RS08030 (ECENHK_07840) ompA 1711624..1712679 (-) 1056 WP_014883252.1 porin OmpA -
  ECENHK_RS08035 (ECENHK_07845) sulA 1713034..1713543 (-) 510 WP_014883253.1 SOS-induced cell division inhibitor SulA -
  ECENHK_RS08040 (ECENHK_07850) sxy/tfoX 1713761..1714387 (+) 627 WP_014883254.1 TfoX/Sxy family DNA transformation protein Regulator
  ECENHK_RS08045 (ECENHK_07855) yccS 1714344..1716506 (-) 2163 WP_014883255.1 YccS family putative transporter -
  ECENHK_RS08050 (ECENHK_07860) - 1716526..1716972 (-) 447 WP_014883256.1 YccF domain-containing protein -
  ECENHK_RS08055 (ECENHK_07865) helD 1717096..1719150 (+) 2055 WP_014883257.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23928.55 Da        Isoelectric Point: 9.0691

>NTDB_id=52355 ECENHK_RS08040 WP_014883254.1 1713761..1714387(+) (sxy/tfoX) [Enterobacter kobei]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAKN
RALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=52355 ECENHK_RS08040 WP_014883254.1 1713761..1714387(+) (sxy/tfoX) [Enterobacter kobei]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGGAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGCCCT
GTTCGGTGGCTATACCCTGGCGGTAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCGTGTG
AAGAAAGCGCAAAATACTGTGTAAAAAATGCCGCCTCTTTTTTGACGTTGATGAAACGAGGCCGCCCGGTACTTCTCAAC
TATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCCTCTTTCGCGCTCAATGCGGCGAG
GAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACTTTTCAGCTTGAGGTATTACTTT
TCGAAGCGGGCATTACTAACGAAGAGACGCTGCGGGCGCTGGGTGCCAGGGAGTGCTGGTTGAAAATGCGGGCTAAAAAT
AGGGCACTCGGTATTAAAGTGCTCTTTGCCCTTGAGGGGGCTATTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2W0GP96

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.635

97.596

0.562

Multiple sequence alignment