Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | U471_RS08050 | Genome accession | NC_022653 |
| Coordinates | 1614328..1614690 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens CC178 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1609328..1619690
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U471_RS08020 (U471_16520) | flgD | 1610231..1610671 (+) | 441 | WP_012117554.1 | flagellar hook assembly protein FlgD | - |
| U471_RS08025 (U471_16530) | flgG | 1610696..1611472 (+) | 777 | WP_007409783.1 | flagellar basal body rod protein FlgG | - |
| U471_RS08030 (U471_16540) | - | 1611512..1611727 (+) | 216 | WP_003154243.1 | flagellar FlbD family protein | - |
| U471_RS08035 (U471_16550) | fliL | 1611724..1612143 (+) | 420 | WP_003154241.1 | flagellar basal body-associated protein FliL | - |
| U471_RS08040 (U471_16560) | fliM | 1612177..1613175 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| U471_RS08045 (U471_16570) | fliY | 1613165..1614301 (+) | 1137 | WP_012117555.1 | flagellar motor switch phosphatase FliY | - |
| U471_RS08050 (U471_16580) | pilH | 1614328..1614690 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| U471_RS08055 (U471_16590) | fliZ | 1614705..1615358 (+) | 654 | WP_003154237.1 | flagella biosynthesis regulatory protein FliZ | - |
| U471_RS08060 (U471_16600) | fliP | 1615351..1616016 (+) | 666 | WP_012117556.1 | flagellar type III secretion system pore protein FliP | - |
| U471_RS08065 (U471_16610) | fliQ | 1616031..1616300 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| U471_RS08070 (U471_16620) | fliR | 1616307..1617086 (+) | 780 | WP_012117557.1 | flagellar biosynthetic protein FliR | - |
| U471_RS08075 (U471_16630) | flhB | 1617086..1618165 (+) | 1080 | WP_007409787.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=52350 U471_RS08050 WP_003154238.1 1614328..1614690(+) (pilH) [Bacillus amyloliquefaciens CC178]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=52350 U471_RS08050 WP_003154238.1 1614328..1614690(+) (pilH) [Bacillus amyloliquefaciens CC178]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATTATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAGGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATTATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |