Detailed information NTG0523101

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: J6N91_RS00860
• Genome accession: NZ_CP081698
• Coordinates: 182807..183790 (+)
• Length: 327 a.a.
• NCBI ID: WP_001411576.1
• Uniprot ID: -
• Organism: Escherichia coli strain CT02
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 177807..188790

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6N91_RS00845 (J6N91_00840)	dppA	179107..180714 (+)	1608	WP_001222881.1	dipeptide ABC transporter substrate-binding protein DppA	-
J6N91_RS00850 (J6N91_00845)	dppB	180865..181884 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
J6N91_RS00855 (J6N91_00850)	dppC	181894..182796 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
J6N91_RS00860 (J6N91_00855)	amiE	182807..183790 (+)	984	WP_001411576.1	dipeptide ABC transporter ATP-binding protein	Regulator
J6N91_RS00865 (J6N91_00860)	dppF	183787..184791 (+)	1005	WP_000107017.1	dipeptide ABC transporter ATP-binding subunit DppF	-
J6N91_RS00870 (J6N91_00865)	yhjV	184821..186092 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
J6N91_RS00875 (J6N91_00870)	-	186568..186675 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
J6N91_RS00880 (J6N91_00875)	-	187051..187158 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
J6N91_RS00885 (J6N91_00880)	-	187534..187641 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
J6N91_RS00890 (J6N91_00885)	-	188017..188124 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35874.39 Da
• Isoelectric Point: 6.5814

>NTDB_id=523101 J6N91_RS00860 WP_001411576.1 182807..183790(+) (amiE) [Escherichia coli strain CT02]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DTGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=523101 J6N91_RS00860 WP_001411576.1 182807..183790(+) (amiE) [Escherichia coli strain CT02]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCATTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAGCTGGAGTTTAACGGCCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGGGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGATC
TGGCTCTGGTGGCGGAAGCTGCGCATAAAATCATTGTGATGTATGCCGGTCAAGTGGTGGAAACGGGCGATGCTCACGCC
ATCTTCCATGCGCCGCGTCATCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTTT
GGCGTCGTTACCTGGCGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATACCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	45.89	89.297	0.41
amiE	Streptococcus thermophilus LMG 18311	45.548	89.297	0.407
amiE	Streptococcus thermophilus LMD-9	45.548	89.297	0.407
oppD	Streptococcus mutans UA159	41.379	97.554	0.404