Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   JG783_RS17475 Genome accession   NZ_CP066891
Coordinates   3480415..3481011 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain XHKP53     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3475415..3486011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JG783_RS17460 helD 3475623..3477677 (-) 2055 WP_002898429.1 DNA helicase IV -
  JG783_RS17465 - 3477802..3478248 (+) 447 WP_002898425.1 YccF domain-containing protein -
  JG783_RS17470 yccS 3478266..3480401 (+) 2136 WP_002898422.1 YccS family putative transporter -
  JG783_RS17475 sxy/tfoX 3480415..3481011 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  JG783_RS17480 sulA 3481360..3481869 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  JG783_RS17485 ompA 3482222..3483292 (+) 1071 WP_062954987.1 porin OmpA -
  JG783_RS17490 matP 3483424..3483876 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  JG783_RS17495 - 3484062..3485819 (+) 1758 WP_002898401.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=523027 JG783_RS17475 WP_004150836.1 3480415..3481011(-) (sxy/tfoX) [Klebsiella pneumoniae strain XHKP53]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=523027 JG783_RS17475 WP_004150836.1 3480415..3481011(-) (sxy/tfoX) [Klebsiella pneumoniae strain XHKP53]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51