Detailed information NTG0522928

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: JCR23_RS09580
• Genome accession: NZ_CP066883
• Coordinates: 2076750..2077859 (+)
• Length: 369 a.a.
• NCBI ID: WP_047034524.1
• Uniprot ID: -
• Organism: Elizabethkingia sp. M8
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2071750..2082859

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JCR23_RS09545 (JCR23_09545)	-	2071978..2072175 (+)	198	WP_078412083.1	hypothetical protein	-
JCR23_RS09550 (JCR23_09550)	-	2072182..2072361 (+)	180	WP_146111340.1	hypothetical protein	-
JCR23_RS09555 (JCR23_09555)	-	2072456..2072914 (+)	459	WP_200402428.1	hypothetical protein	-
JCR23_RS09560 (JCR23_09560)	-	2072877..2073437 (-)	561	WP_200402429.1	BT4734/BF3469 family protein	-
JCR23_RS09565 (JCR23_09565)	-	2073927..2074649 (+)	723	Protein_1901	YifB family Mg chelatase-like AAA ATPase	-
JCR23_RS09570 (JCR23_09570)	-	2074656..2075777 (-)	1122	WP_009086443.1	DUF3078 domain-containing protein	-
JCR23_RS09575 (JCR23_09575)	-	2075945..2076712 (+)	768	WP_200402430.1	rhomboid family intramembrane serine protease	-
JCR23_RS09580 (JCR23_09580)	dprA	2076750..2077859 (+)	1110	WP_047034524.1	DNA-processing protein DprA	Machinery gene
JCR23_RS09585 (JCR23_09585)	gdhA	2078045..2079409 (+)	1365	WP_009086437.1	NADP-specific glutamate dehydrogenase	-
JCR23_RS09590 (JCR23_09590)	-	2079498..2079773 (-)	276	WP_200402431.1	hypothetical protein	-
JCR23_RS09595 (JCR23_09595)	-	2079900..2080391 (-)	492	WP_021347638.1	YkgJ family cysteine cluster protein	-
JCR23_RS09600 (JCR23_09600)	-	2080488..2080868 (+)	381	WP_021347637.1	group III truncated hemoglobin	-
JCR23_RS09605 (JCR23_09605)	-	2080865..2081596 (-)	732	WP_009086427.1	DNA alkylation repair protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41244.24 Da
• Isoelectric Point: 7.4791

>NTDB_id=522928 JCR23_RS09580 WP_047034524.1 2076750..2077859(+) (dprA) [Elizabethkingia sp. M8]
MFSKEHLYSIALRHCPQIGDLHFKKIVTTIGSAKEAWSLPRRELVKLYGIGNKIVEDIGKDSHLQFAERELEFCYKNNIQ
ILLSHQGNFPELLYQCDDTPAILYQKGKFDHHRTNISIVGTRKNSKYGKEFITEFLYSLKDNNIQTISGLAIGTDTCAHE
ESLKNNIPTTAILAHGFHILYPNTNRKLADKLLENGGCLFTEFNSSQPPIRESFIQRNRIIAGISPSTIITETAYGGGSV
STANFASIYNREVLALPGSVNDKYSQGCNLLISQNKARIIVSISDTIDYLGLVTKPVEQLPLFHKKEILASLTSDQQLIL
SAITDSPNINPDEIAEKVSLPIYKILPIILDLELLGYIKASSGRQYFPS

Nucleotide

• Length: 1110 bp

>NTDB_id=522928 JCR23_RS09580 WP_047034524.1 2076750..2077859(+) (dprA) [Elizabethkingia sp. M8]
ATGTTTTCCAAAGAACATCTTTATTCTATAGCACTAAGACATTGCCCGCAAATCGGTGATTTACACTTCAAGAAAATAGT
TACCACAATTGGTTCAGCAAAAGAAGCGTGGAGCCTTCCCCGACGTGAACTTGTCAAATTGTATGGTATCGGAAACAAGA
TAGTGGAAGACATAGGGAAAGATTCCCATTTACAATTTGCAGAAAGAGAACTAGAGTTCTGCTATAAGAATAACATTCAG
ATCCTACTTTCTCATCAGGGAAATTTCCCGGAATTATTATATCAGTGTGATGACACACCAGCTATACTCTATCAGAAAGG
AAAATTTGACCACCACAGGACAAATATTAGTATAGTAGGTACAAGGAAAAATTCGAAGTACGGAAAAGAGTTTATTACCG
AATTTCTGTATTCTCTAAAAGATAACAATATCCAGACAATTAGCGGACTCGCTATTGGTACAGATACTTGCGCACATGAA
GAATCTCTAAAAAACAATATTCCGACAACTGCAATACTCGCACATGGTTTTCATATACTGTATCCCAATACAAACAGAAA
GTTAGCCGACAAATTATTGGAAAATGGAGGATGTCTTTTTACTGAATTCAATTCATCACAGCCACCGATAAGAGAAAGCT
TTATCCAAAGAAACAGAATTATTGCTGGTATATCGCCCTCCACAATCATAACAGAAACGGCTTATGGCGGAGGATCTGTA
AGTACAGCCAACTTTGCCAGCATATATAACCGCGAAGTACTTGCGCTCCCAGGTTCTGTCAATGACAAATACAGCCAAGG
CTGCAACCTTTTAATTTCGCAAAACAAAGCAAGAATTATCGTTTCCATTTCTGACACGATTGACTATCTGGGCCTTGTTA
CCAAGCCTGTGGAACAACTTCCCTTATTTCATAAAAAAGAAATCCTTGCGAGCCTTACATCAGACCAACAACTGATTCTA
TCTGCTATTACGGATTCCCCTAACATAAATCCTGATGAAATTGCCGAAAAAGTTTCTCTCCCCATTTACAAAATTCTTCC
CATAATATTAGATCTGGAACTTTTGGGGTACATTAAAGCCTCTTCCGGGAGACAATATTTCCCAAGCTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-280)

• DprA winged helix domain (DprA_WH) (309-363)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	51.639	99.187	0.512