Detailed information NTG0522730

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K5T46_RS06630
• Genome accession: NZ_CP081489
• Coordinates: 1391769..1392794 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli BL21(DE3)
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1386769..1397794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5T46_RS06605 (K5T46_06605)	metJ	1387206..1387523 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
K5T46_RS06610 (K5T46_06610)	yiiX	1387707..1388315 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
K5T46_RS06615 (K5T46_06615)	-	1388322..1388945 (+)	624	WP_000720774.1	TIGR02117 family protein	-
K5T46_RS06620 (K5T46_06620)	rpmE	1389000..1389212 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
K5T46_RS06625 (K5T46_06625)	priA	1389415..1391613 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
K5T46_RS06630 (K5T46_06630)	cytR	1391769..1392794 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K5T46_RS06635 (K5T46_06635)	ftsN	1392886..1393845 (+)	960	WP_000068828.1	cell division protein FtsN	-
K5T46_RS06640 (K5T46_06640)	hslV	1393938..1394468 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K5T46_RS06645 (K5T46_06645)	hslU	1394478..1395809 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
K5T46_RS06650 (K5T46_06650)	menA	1395876..1396802 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K5T46_RS06655 (K5T46_06655)	rraA	1396895..1397380 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K5T46_RS06660 (K5T46_06660)	zapB	1397465..1397710 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=522730 K5T46_RS06630 WP_000644904.1 1391769..1392794(+) (cytR) [Escherichia coli BL21(DE3)]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=522730 K5T46_RS06630 WP_000644904.1 1391769..1392794(+) (cytR) [Escherichia coli BL21(DE3)]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628