Detailed information NTG0052269

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: P423_RS22625
• Genome accession: NC_022648
• Coordinates: 4475593..4476618 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli JJ1886
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4470593..4481618

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P423_RS22595 (P423_21785)	zapB	4470677..4470922 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
P423_RS22600 (P423_21790)	rraA	4471007..4471492 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
P423_RS22605 (P423_21795)	menA	4471585..4472511 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
P423_RS22610 (P423_21800)	hslU	4472578..4473909 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
P423_RS22615 (P423_21805)	hslV	4473919..4474449 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
P423_RS22620 (P423_21810)	ftsN	4474542..4475501 (-)	960	WP_000068834.1	cell division protein FtsN	-
P423_RS22625 (P423_21815)	cytR	4475593..4476618 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
P423_RS22630 (P423_21820)	priA	4476774..4478972 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
P423_RS22635 (P423_21825)	rpmE	4479175..4479387 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
P423_RS22640 (P423_21830)	yiiX	4479448..4480056 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
P423_RS22645 (P423_21835)	metJ	4480116..4480433 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=52269 P423_RS22625 WP_000644908.1 4475593..4476618(-) (cytR) [Escherichia coli JJ1886]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=52269 P423_RS22625 WP_000644908.1 4475593..4476618(-) (cytR) [Escherichia coli JJ1886]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625