Detailed information NTG0522561

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: I6G78_RS09810
• Genome accession: NZ_CP066791
• Coordinates: 1784690..1785859 (+)
• Length: 389 a.a.
• NCBI ID: WP_015877057.1
• Uniprot ID: A0AAQ0BUH7
• Organism: Burkholderia glumae strain FDAARGOS_921
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1779690..1790859

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G78_RS09785 (I6G78_09785)	hisC	1780120..1781187 (+)	1068	WP_035983605.1	histidinol-phosphate transaminase	-
I6G78_RS09790 (I6G78_09790)	-	1781251..1781520 (-)	270	WP_015877053.1	YfhL family 4Fe-4S dicluster ferredoxin	-
I6G78_RS09795 (I6G78_09795)	-	1781810..1783132 (+)	1323	WP_015877054.1	TIGR00366 family protein	-
I6G78_RS09800 (I6G78_09800)	coaD	1783277..1783777 (-)	501	WP_015877055.1	pantetheine-phosphate adenylyltransferase	-
I6G78_RS09805 (I6G78_09805)	rsmD	1783888..1784502 (-)	615	WP_035983602.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6G78_RS09810 (I6G78_09810)	pilA	1784690..1785859 (+)	1170	WP_015877057.1	signal recognition particle-docking protein FtsY	Machinery gene
I6G78_RS09815 (I6G78_09815)	ybiB	1786429..1787406 (+)	978	WP_015877058.1	DNA-binding protein YbiB	-
I6G78_RS09820 (I6G78_09820)	leuA	1787820..1789469 (+)	1650	WP_015877059.1	2-isopropylmalate synthase	-
I6G78_RS09825 (I6G78_09825)	-	1789666..1790052 (-)	387	WP_015877060.1	nuclear transport factor 2 family protein	-
I6G78_RS09830 (I6G78_09830)	-	1790092..1790661 (-)	570	WP_015877061.1	acyloxyacyl hydrolase	-

Sequence

Protein

• Length: 389 a.a.
• Molecular weight: 40622.57 Da
• Isoelectric Point: 5.4803

>NTDB_id=522561 I6G78_RS09810 WP_015877057.1 1784690..1785859(+) (pilA) [Burkholderia glumae strain FDAARGOS_921]
MFSFFKRLIGSKADDASQDAPAADEQASAAHAPDAAGHAAAAASRPAPAPAHDAEPAASPAAPVPAAPAPAAVPAAPAVE
VVPPPAPEPAAKKSWIARLRSGLSKTSTSLTNVFVNTRIDDELYEELEAALLMSDAGIDATEYLLGALREKVRAERLSDP
LQVKAALRALLVDLLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQRFDQSVLLAAGDTFRAAAREQLAIWG
ERNNVTVVQQESGDPAAVIFDAVGAARARKIDVVMADTAGRLPTQLHLMEELRKVKRVIGKAQSDAPHEVLLVIDANTGQ
NALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFNAEEFADALLG

Nucleotide

• Length: 1170 bp

>NTDB_id=522561 I6G78_RS09810 WP_015877057.1 1784690..1785859(+) (pilA) [Burkholderia glumae strain FDAARGOS_921]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGACGCGTCGCAGGACGCGCCGGCGGCCGACGAGCAAGC
CAGCGCGGCTCACGCGCCGGACGCGGCCGGGCATGCCGCCGCCGCGGCGAGCCGGCCGGCGCCCGCGCCGGCACACGACG
CCGAACCCGCCGCCAGCCCGGCTGCACCGGTGCCGGCCGCCCCCGCCCCTGCGGCCGTGCCCGCCGCCCCCGCCGTCGAA
GTCGTGCCGCCGCCCGCGCCTGAGCCGGCCGCGAAAAAATCCTGGATCGCACGACTACGCTCCGGGCTCTCGAAGACGAG
CACGAGCCTCACCAACGTGTTCGTCAATACCAGGATCGACGACGAACTCTACGAGGAGCTCGAAGCCGCGCTGCTGATGT
CCGATGCCGGCATCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCGCCGAACGCCTGAGCGATCCG
CTGCAGGTGAAGGCCGCGCTGCGCGCGCTGCTCGTCGACCTGCTCGCGCCGCTCGAGAAATCGCTGATGCTGGGCCGCGC
CCAGCCGCTCGTGATGATGATCGCGGGCGTCAACGGAGCCGGCAAGACCACCAGCATCGGTAAGCTCGCCAAACACCTGC
AGCGCTTCGACCAATCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGCTCGCGATCTGGGGC
GAGCGCAACAACGTGACCGTGGTGCAGCAGGAAAGCGGCGATCCGGCCGCCGTGATATTCGATGCGGTCGGCGCCGCGCG
CGCGCGCAAGATCGACGTGGTGATGGCCGACACCGCGGGCCGGTTGCCCACGCAGTTGCACCTGATGGAGGAACTGCGCA
AGGTCAAGCGCGTGATCGGCAAGGCGCAGAGCGACGCGCCGCACGAGGTGCTGCTCGTGATCGACGCCAATACCGGCCAG
AACGCGCTCGCCCAGGTGAAGGCATTCGACGACGCGCTGGGCCTGACCGGGCTCATCGTCACCAAGCTCGACGGCACCGC
GAAGGGCGGCATTCTCGCCGCGATCGCGCGGCAGCGGCCGATACCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGG
ACTTGCAGCCGTTCAACGCCGAGGAATTCGCCGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (108-168)

• SRP54-type protein, GTPase domain (SRP54) (190-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.82	100	0.558