Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   K4756_RS20255 Genome accession   NZ_CP081458
Coordinates   3962207..3963001 (-) Length   264 a.a.
NCBI ID   WP_015483958.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain ps4060     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3957207..3968001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K4756_RS20230 (K4756_20135) rocD 3957663..3958868 (-) 1206 WP_015483955.1 ornithine aminotransferase -
  K4756_RS20235 (K4756_20140) rocR 3959109..3960494 (+) 1386 WP_015385164.1 arginine utilization regulatory protein RocR -
  K4756_RS20240 (K4756_20145) - 3960476..3960664 (-) 189 Protein_3942 ATP-binding protein -
  K4756_RS20245 (K4756_20150) - 3960777..3960903 (-) 127 Protein_3943 hypothetical protein -
  K4756_RS20250 (K4756_20155) htrA 3960923..3962125 (-) 1203 WP_021481077.1 serine protease HtrC Regulator
  K4756_RS20255 (K4756_20160) vicX 3962207..3963001 (-) 795 WP_015483958.1 MBL fold metallo-hydrolase Regulator
  K4756_RS20260 (K4756_20165) walI 3963023..3963865 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  K4756_RS20265 (K4756_20170) walH 3963852..3965219 (-) 1368 WP_041518280.1 WalRK two-component regulatory system regulator WalH -
  K4756_RS20270 (K4756_20175) walK 3965209..3967044 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  K4756_RS20275 (K4756_20180) walR 3967052..3967759 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29282.29 Da        Isoelectric Point: 6.0287

>NTDB_id=522553 K4756_RS20255 WP_015483958.1 3962207..3963001(-) (vicX) [Bacillus subtilis subsp. subtilis strain ps4060]
MSLQFSVLASGSTGNAFYLETENHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=522553 K4756_RS20255 WP_015483958.1 3962207..3963001(-) (vicX) [Bacillus subtilis subsp. subtilis strain ps4060]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGAATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAATAACATGAAGGAGCTGGCAAGAATGTCCGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACAGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53