Detailed information NTG0522478

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: K4756_RS08540
• Genome accession: NZ_CP081458
• Coordinates: 1634094..1635083 (+)
• Length: 329 a.a.
• NCBI ID: WP_015383647.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain ps4060
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1629094..1640083

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K4756_RS08525 (K4756_08485)	acpP	1629291..1629524 (+)	234	WP_003154310.1	acyl carrier protein	-
K4756_RS08530 (K4756_08490)	rncS	1629664..1630413 (+)	750	WP_003232030.1	ribonuclease III	-
K4756_RS08535 (K4756_08495)	smc	1630514..1634074 (+)	3561	WP_015383646.1	chromosome segregation protein SMC	-
K4756_RS08540 (K4756_08500)	pilA	1634094..1635083 (+)	990	WP_015383647.1	signal recognition particle-docking protein FtsY	Machinery gene
K4756_RS08545 (K4756_08505)	sivC	1635119..1635604 (-)	486	WP_003245834.1	Ig-like domain-containing protein	-
K4756_RS08550 (K4756_08510)	srpM	1635782..1636114 (+)	333	WP_003238590.1	putative DNA-binding protein	-
K4756_RS08555 (K4756_08515)	ffh	1636128..1637468 (+)	1341	WP_014113771.1	signal recognition particle protein	-
K4756_RS08560 (K4756_08520)	rpsP	1637574..1637846 (+)	273	WP_003220815.1	30S ribosomal protein S16	-
K4756_RS08565 (K4756_08525)	khpA	1637846..1638091 (+)	246	WP_014476792.1	KH domain-containing protein	-
K4756_RS08570 (K4756_08530)	ylqD	1638213..1638599 (+)	387	WP_015383649.1	YlqD family protein	-
K4756_RS08575 (K4756_08535)	rimM	1638604..1639128 (+)	525	WP_003232013.1	ribosome maturation factor RimM	-
K4756_RS08580 (K4756_08540)	trmD	1639125..1639856 (+)	732	WP_015383650.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36356.55 Da
• Isoelectric Point: 5.0164

>NTDB_id=522478 K4756_RS08540 WP_015383647.1 1634094..1635083(+) (pilA) [Bacillus subtilis subsp. subtilis strain ps4060]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADILICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=522478 K4756_RS08540 WP_015383647.1 1634094..1635083(+) (pilA) [Bacillus subtilis subsp. subtilis strain ps4060]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTTGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAAGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTTAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCAGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATATATTAATTTGTGATACGGCAGGTCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAGTTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAGGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGATCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

• SRP54-type protein, GTPase domain (SRP54) (121-320)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	44.04	91.793	0.404