Detailed information NTG0522446

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: RP6297_RS01265
• Genome accession: NZ_CP066771
• Coordinates: 269000..270190 (-)
• Length: 396 a.a.
• NCBI ID: WP_037027691.1
• Uniprot ID: -
• Organism: Ralstonia pickettii strain K-288
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 264000..275190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RP6297_RS01240 (RP6297_00248)	-	264524..265033 (-)	510	WP_144243999.1	hypothetical protein	-
RP6297_RS01250 (RP6297_00252)	-	267209..267775 (-)	567	WP_051917719.1	hypothetical protein	-
RP6297_RS01255 (RP6297_00253)	-	267779..268372 (-)	594	WP_144243998.1	PAAR domain-containing protein	-
RP6297_RS01260 (RP6297_00254)	-	268384..268746 (-)	363	WP_037027693.1	PAAR domain-containing protein	-
RP6297_RS01265 (RP6297_00255)	pilA	269000..270190 (-)	1191	WP_037027691.1	signal recognition particle-docking protein FtsY	Machinery gene
RP6297_RS01270 (RP6297_00256)	-	270251..271747 (+)	1497	WP_037027688.1	pitrilysin family protein	-
RP6297_RS01275 (RP6297_00257)	-	271747..273099 (+)	1353	WP_037027686.1	pitrilysin family protein	-
RP6297_RS01280 (RP6297_00258)	rsmD	273193..273849 (+)	657	WP_037027683.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
RP6297_RS01285 (RP6297_00259)	coaD	274047..274550 (+)	504	WP_004633426.1	pantetheine-phosphate adenylyltransferase	-
RP6297_RS01290 (RP6297_00260)	-	274601..274864 (+)	264	WP_004633424.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 396 a.a.
• Molecular weight: 41706.22 Da
• Isoelectric Point: 6.0716

>NTDB_id=522446 RP6297_RS01265 WP_037027691.1 269000..270190(-) (pilA) [Ralstonia pickettii strain K-288]
MFSFWKKRKAEPQPAAEPTPAVAPEAAQAPAPAAIPGPAPVPAPAAAPQPVAAPAPVAVPVAAPAHVAVPDAPAEQPALD
VQADDVETVPTPAVIEQARKGWMSRLRSGLSKTSKGLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLAELRRRIK
AQRIETSEGVKTALRDLLVELLHPLEKTMVLGREQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAR
EQLVIWGQRNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVTAKAMATAPHETLLV
IDGNTGQNALAQVKAFDEALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1191 bp

>NTDB_id=522446 RP6297_RS01265 WP_037027691.1 269000..270190(-) (pilA) [Ralstonia pickettii strain K-288]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAACCGGCCGCCGAACCCACGCCCGCAGTGGCGCCCGAAGCCGC
GCAGGCGCCTGCCCCGGCTGCCATCCCCGGCCCCGCTCCCGTACCCGCACCAGCTGCAGCACCCCAGCCTGTCGCTGCGC
CGGCTCCCGTAGCCGTACCCGTCGCTGCGCCGGCCCACGTTGCCGTGCCTGACGCACCTGCCGAGCAGCCTGCGCTCGAC
GTGCAAGCCGACGACGTCGAAACCGTGCCCACGCCCGCCGTCATCGAACAGGCCCGCAAGGGCTGGATGTCACGCCTGCG
CTCCGGCCTGTCGAAGACGAGCAAGGGCCTGACCACGCTGTTCGTCGGCGTGAAGGTGGACGAAGCGCTGTTCGAAGAGC
TGGAGACCGCCCTGCTGATGGCCGATGCCGGTGTCGACGCCACCGAATACCTGCTGGCCGAACTGCGCCGCCGCATCAAG
GCCCAGCGCATCGAAACCTCGGAGGGCGTGAAAACTGCCCTGCGCGACCTGCTCGTGGAGCTGCTGCACCCCCTAGAAAA
AACCATGGTGCTCGGCCGCGAACAGCCAATGGTGATCATGATCGCGGGCGTCAACGGCGCCGGCAAGACGACCAGCATCG
GCAAGCTGTGCAAGCACTTCCAGACCTACGGCCAATCGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCCGCCGCACGC
GAGCAACTCGTGATCTGGGGTCAGCGCAACAACGTCACGGTCGTGGCGCAGGAATCGGGCGACCCGGCCGCCGTGATCTT
CGATGCAGTGAACGCAGCGCGCGCACGCGGCATCGACATCGTCATGGCCGACACCGCTGGCCGCCTGCCGACGCAGCTGC
ACCTGATGGAAGAACTCAAGAAAGTGCGCCGCGTGACCGCCAAGGCGATGGCGACGGCGCCGCACGAAACGCTGCTGGTG
ATCGACGGCAACACGGGGCAGAACGCCCTCGCACAAGTTAAAGCCTTTGATGAAGCGCTTGGCCTCACCGGCCTGATCGT
CACCAAGCTGGACGGCACCGCTAAGGGCGGCATCCTGGCCGCGATTGCGCGGCAGCGGCCGGTGCCGGTCTACTTCATCG
GCGTGGGCGAGCAGGTGGAGGATCTGCAGCCGTTTTCGGCGCGGGAATTTGCGGATGCGTTGTTGGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (196-396)

• SRP54-type protein, helical bundle domain (SRP54_N) (115-176)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.278	100	0.551