Detailed information NTG0522444

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: JFN94_RS14420
• Genome accession: NZ_CP066769
• Coordinates: 3076308..3077447 (+)
• Length: 379 a.a.
• NCBI ID: WP_124827884.1
• Uniprot ID: -
• Organism: Burkholderia anthina strain BJQ0011
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3071308..3082447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JFN94_RS14390 (JFN94_14390)	-	3071945..3072550 (+)	606	WP_124827889.1	50S ribosomal protein L25/general stress protein Ctc	-
JFN94_RS14395 (JFN94_14395)	pth	3072670..3073269 (+)	600	WP_124827888.1	aminoacyl-tRNA hydrolase	-
JFN94_RS14400 (JFN94_14400)	hisC	3073400..3074467 (+)	1068	WP_124827887.1	histidinol-phosphate transaminase	-
JFN94_RS14405 (JFN94_14405)	-	3074557..3074823 (-)	267	WP_039321670.1	YfhL family 4Fe-4S dicluster ferredoxin	-
JFN94_RS14410 (JFN94_14410)	coaD	3074883..3075380 (-)	498	WP_124827886.1	pantetheine-phosphate adenylyltransferase	-
JFN94_RS14415 (JFN94_14415)	rsmD	3075492..3076106 (-)	615	WP_124827885.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
JFN94_RS14420 (JFN94_14420)	pilA	3076308..3077447 (+)	1140	WP_124827884.1	signal recognition particle-docking protein FtsY	Machinery gene
JFN94_RS14425 (JFN94_14425)	maiA	3077525..3078169 (-)	645	WP_124827883.1	maleylacetoacetate isomerase	-
JFN94_RS14430 (JFN94_14430)	ybiB	3078370..3079344 (+)	975	WP_124827882.1	DNA-binding protein YbiB	-
JFN94_RS14435 (JFN94_14435)	leuA	3079726..3081372 (+)	1647	WP_175750991.1	2-isopropylmalate synthase	-
JFN94_RS14440 (JFN94_14440)	-	3081516..3081899 (-)	384	WP_124827880.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40329.03 Da
• Isoelectric Point: 4.7389

>NTDB_id=522444 JFN94_RS14420 WP_124827884.1 3076308..3077447(+) (pilA) [Burkholderia anthina strain BJQ0011]
MFSFFKRFKKTQESDSAESQSADAPQPDETSEAPEAPEAPQAPAQPAAPAVVMTVTPTNDGSDEVVETVEIVPPPTQDAS
AKKSWLARLKTGLAKTGSSITGVFINTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKGALHDL
LVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNVTVVQQ
ESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNALTQVKAFD
DALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAAEFADALLG

Nucleotide

• Length: 1140 bp

>NTDB_id=522444 JFN94_RS14420 WP_124827884.1 3076308..3077447(+) (pilA) [Burkholderia anthina strain BJQ0011]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGTCCGACTCCGCGGAATCGCAATCGGCCGACGCGCCGCAACC
GGACGAAACGTCCGAAGCGCCTGAAGCGCCCGAGGCCCCGCAAGCCCCCGCGCAGCCAGCCGCGCCGGCCGTCGTGATGA
CGGTCACGCCGACCAACGACGGTAGCGACGAGGTCGTCGAAACGGTCGAGATCGTGCCGCCGCCCACGCAGGATGCGAGC
GCGAAGAAATCGTGGCTCGCCCGCCTGAAAACGGGGCTCGCGAAGACGGGCTCGAGCATTACCGGCGTGTTCATCAACAC
GAAGATCGACGAGGATCTGTACGAAGAGCTCGAAACCGCGCTGCTGATGTCCGACGCCGGCGTCGACGCGACCGAGTACC
TGCTCGGCGCGCTGCGCGAAAAGGTGCGCGTGGGCCGGCTGACCGACCCGCAGCAGGTGAAGGGCGCGCTGCACGACCTG
CTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGATGATGATCACCGGCGT
GAACGGGGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGTCGGTGCTGCTGGCCG
CGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAACGCAACAACGTGACGGTCGTGCAGCAG
GAAAGCGGCGACCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGACGTGATGATGGCCGA
CACGGCCGGGCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAAAAGGTGAAGCGGGTGATCTCGAAGGCGCACG
ACGGCGCGCCGCACGAGGTGCTGCTCGTGATCGACGCGAACACGGGCCAGAACGCGCTCACGCAGGTGAAGGCATTCGAC
GACGCGCTCGGCCTCACCGGCCTGATCGTCACGAAACTGGACGGCACCGCGAAGGGCGGCATTCTCGCCGCGATCGCGCG
GCAGCGTCCGGTGCCTGTCTACTTCATCGGCGTCGGCGAGAAGGTGGAAGACCTGCAGCCGTTCAGCGCAGCGGAATTCG
CGGATGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (180-379)

• SRP54-type protein, helical bundle domain (SRP54_N) (97-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.957	100	0.594