Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | JG534_RS05555 | Genome accession | NZ_CP066745 |
| Coordinates | 1070776..1071078 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CJP19-D996 isolate CFSAN091032 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1065776..1076078
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JG534_RS05530 (JG534_05530) | rpsR | 1066138..1066398 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| JG534_RS05535 (JG534_05535) | lon | 1066459..1068834 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| JG534_RS05540 (JG534_05540) | - | 1068851..1069498 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| JG534_RS05545 (JG534_05545) | fliW | 1069659..1070048 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| JG534_RS05550 (JG534_05550) | proC | 1070048..1070779 (+) | 732 | WP_002868635.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| JG534_RS05555 (JG534_05555) | ctsT | 1070776..1071078 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| JG534_RS05560 (JG534_05560) | - | 1071075..1071737 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| JG534_RS05565 (JG534_05565) | - | 1071734..1072186 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| JG534_RS05570 (JG534_05570) | hemD | 1072183..1072812 (-) | 630 | WP_002868634.1 | uroporphyrinogen-III synthase | - |
| JG534_RS05575 (JG534_05575) | thiE | 1072790..1073422 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| JG534_RS05580 (JG534_05580) | thiD | 1073412..1074224 (-) | 813 | WP_002868633.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| JG534_RS05585 (JG534_05585) | - | 1074221..1074907 (-) | 687 | WP_002868632.1 | endonuclease III domain-containing protein | - |
| JG534_RS05590 (JG534_05590) | - | 1074904..1075665 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=522282 JG534_RS05555 WP_002853046.1 1070776..1071078(+) (ctsT) [Campylobacter jejuni strain CJP19-D996 isolate CFSAN091032]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=522282 JG534_RS05555 WP_002853046.1 1070776..1071078(+) (ctsT) [Campylobacter jejuni strain CJP19-D996 isolate CFSAN091032]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |