Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   JG534_RS03645 Genome accession   NZ_CP066745
Coordinates   687450..687887 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain CJP19-D996 isolate CFSAN091032     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 682450..692887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JG534_RS08835 - 682942..684093 (+) 1152 WP_237924374.1 sensor histidine kinase KdpD -
  JG534_RS08840 - 684117..684869 (+) 753 WP_237921608.1 DUF4118 domain-containing protein -
  JG534_RS03630 (JG534_03630) uvrB 684864..686837 (-) 1974 WP_002855027.1 excinuclease ABC subunit UvrB -
  JG534_RS03635 (JG534_03635) - 686991..687221 (+) 231 WP_002852327.1 hypothetical protein -
  JG534_RS03640 (JG534_03640) - 687211..687453 (+) 243 WP_002854947.1 hypothetical protein -
  JG534_RS03645 (JG534_03645) Cj0683 687450..687887 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  JG534_RS03650 (JG534_03650) priA 687869..689722 (+) 1854 WP_002860009.1 primosomal protein N' -
  JG534_RS03655 (JG534_03655) cipA 689732..691126 (-) 1395 WP_052773874.1 DUF2972 domain-containing protein -
  JG534_RS03660 (JG534_03660) ispG 691272..692345 (+) 1074 WP_002868411.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=522279 JG534_RS03645 WP_002852324.1 687450..687887(+) (Cj0683) [Campylobacter jejuni strain CJP19-D996 isolate CFSAN091032]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=522279 JG534_RS03645 WP_002852324.1 687450..687887(+) (Cj0683) [Campylobacter jejuni strain CJP19-D996 isolate CFSAN091032]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCACAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAATGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AATGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1