Detailed information NTG0522045

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K5A55_RS01015
• Genome accession: NZ_CP081306
• Coordinates: 206911..207894 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain Ec1079
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 201911..212894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5A55_RS01000 (K5A55_01000)	dppA	203054..204661 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
K5A55_RS01005 (K5A55_01005)	dppB	204969..205988 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K5A55_RS01010 (K5A55_01010)	dppC	205998..206900 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K5A55_RS01015 (K5A55_01015)	amiE	206911..207894 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
K5A55_RS01020 (K5A55_01020)	dppF	207891..208895 (+)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K5A55_RS01025 (K5A55_01025)	yhjV	208925..210196 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
K5A55_RS01030 (K5A55_01030)	-	210672..210779 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K5A55_RS01035 (K5A55_01035)	-	211155..211262 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K5A55_RS01040 (K5A55_01040)	-	211638..211745 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K5A55_RS01045 (K5A55_01045)	-	212121..212228 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=522045 K5A55_RS01015 WP_001196486.1 206911..207894(+) (amiE) [Escherichia coli strain Ec1079]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=522045 K5A55_RS01015 WP_001196486.1 206911..207894(+) (amiE) [Escherichia coli strain Ec1079]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404