Detailed information NTG0521897

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: K3176_RS27070
• Genome accession: NZ_CP081202
• Coordinates: 5612861..5613886 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain P9W
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5607861..5618886

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3176_RS27045 (K3176_27045)	aroE	5608063..5608887 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
K3176_RS27050 (K3176_27050)	hemF	5608945..5609862 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
K3176_RS27055 (K3176_27055)	-	5610053..5611030 (+)	978	WP_023911199.1	quinone oxidoreductase	-
K3176_RS27060 (K3176_27060)	-	5611040..5611597 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
K3176_RS27065 (K3176_27065)	dprA	5611638..5612726 (-)	1089	WP_003118479.1	DNA-processing protein DprA	Machinery gene
K3176_RS27070 (K3176_27070)	tsaP	5612861..5613886 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
K3176_RS27075 (K3176_27075)	def	5614025..5614531 (+)	507	WP_003107059.1	peptide deformylase	-
K3176_RS27080 (K3176_27080)	fmt	5614586..5615530 (+)	945	WP_010793609.1	methionyl-tRNA formyltransferase	-
K3176_RS27085 (K3176_27085)	rsmB	5615527..5616831 (+)	1305	WP_058020100.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
K3176_RS27090 (K3176_27090)	trkA	5616859..5618232 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
K3176_RS27095 (K3176_27095)	-	5618381..5618698 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=521897 K3176_RS27070 WP_003097294.1 5612861..5613886(-) (tsaP) [Pseudomonas aeruginosa strain P9W]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=521897 K3176_RS27070 WP_003097294.1 5612861..5613886(-) (tsaP) [Pseudomonas aeruginosa strain P9W]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATTGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393