Detailed information NTG0521672

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K3072_RS00920
• Genome accession: NZ_CP081010
• Coordinates: 193060..194043 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain 25POL
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 188060..199043

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3072_RS00900 (K3072_00900)	dppA	189204..190811 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
K3072_RS00905 (K3072_00905)	-	190873..191100 (-)	228	WP_000198577.1	hypothetical protein	-
K3072_RS00910 (K3072_00910)	dppB	191118..192137 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K3072_RS00915 (K3072_00915)	dppC	192147..193049 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K3072_RS00920 (K3072_00920)	amiE	193060..194043 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
K3072_RS00925 (K3072_00925)	dppF	194040..195044 (+)	1005	WP_000103580.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K3072_RS00930 (K3072_00930)	yhjV	195074..196345 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
K3072_RS00935 (K3072_00935)	-	196821..196928 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
K3072_RS00940 (K3072_00940)	-	197304..197411 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=521672 K3072_RS00920 WP_001196477.1 193060..194043(+) (amiE) [Escherichia coli strain 25POL]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=521672 K3072_RS00920 WP_001196477.1 193060..194043(+) (amiE) [Escherichia coli strain 25POL]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404