Detailed information NTG0521637

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K3830_RS13050
• Genome accession: NZ_CP081009
• Coordinates: 2744946..2745971 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Stbl4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2739946..2750971

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3830_RS13020 (K3830_13020)	zapB	2740030..2740275 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K3830_RS13025 (K3830_13025)	rraA	2740360..2740845 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K3830_RS13030 (K3830_13030)	menA	2740938..2741864 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K3830_RS13035 (K3830_13035)	hslU	2741931..2743262 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
K3830_RS13040 (K3830_13040)	hslV	2743272..2743802 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K3830_RS13045 (K3830_13045)	ftsN	2743895..2744854 (-)	960	WP_000068828.1	cell division protein FtsN	-
K3830_RS13050 (K3830_13050)	cytR	2744946..2745971 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K3830_RS13055 (K3830_13055)	priA	2746127..2748325 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
K3830_RS13060 (K3830_13060)	rpmE	2748528..2748740 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K3830_RS13065 (K3830_13065)	yiiX	2748801..2749409 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
K3830_RS13070 (K3830_13070)	metJ	2749593..2749910 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=521637 K3830_RS13050 WP_000644904.1 2744946..2745971(-) (cytR) [Escherichia coli strain Stbl4]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=521637 K3830_RS13050 WP_000644904.1 2744946..2745971(-) (cytR) [Escherichia coli strain Stbl4]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628