Detailed information NTG0521573

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K3831_RS16805
• Genome accession: NZ_CP081008
• Coordinates: 3495022..3496047 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain XL10-gold-ultracompetent
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3490022..3501047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3831_RS16775 (K3831_16775)	zapB	3490106..3490351 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K3831_RS16780 (K3831_16780)	rraA	3490436..3490921 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K3831_RS16785 (K3831_16785)	menA	3491014..3491940 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K3831_RS16790 (K3831_16790)	hslU	3492007..3493338 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
K3831_RS16795 (K3831_16795)	hslV	3493348..3493878 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K3831_RS16800 (K3831_16800)	ftsN	3493971..3494930 (-)	960	WP_000068828.1	cell division protein FtsN	-
K3831_RS16805 (K3831_16805)	cytR	3495022..3496047 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K3831_RS16810 (K3831_16810)	priA	3496203..3498401 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
K3831_RS16815 (K3831_16815)	rpmE	3498604..3498816 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K3831_RS16820 (K3831_16820)	yiiX	3498877..3499485 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
K3831_RS16825 (K3831_16825)	metJ	3499669..3499986 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=521573 K3831_RS16805 WP_000644904.1 3495022..3496047(-) (cytR) [Escherichia coli strain XL10-gold-ultracompetent]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=521573 K3831_RS16805 WP_000644904.1 3495022..3496047(-) (cytR) [Escherichia coli strain XL10-gold-ultracompetent]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628