Detailed information NTG0521543

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K3831_RS08100
• Genome accession: NZ_CP081008
• Coordinates: 1722310..1723293 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain XL10-gold-ultracompetent
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1717310..1728293

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3831_RS08080 (K3831_08080)	dppA	1718453..1720060 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
K3831_RS23675 (K3831_08085)	-	1720123..1720350 (-)	228	WP_001300936.1	hypothetical protein	-
K3831_RS08090 (K3831_08090)	dppB	1720368..1721387 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K3831_RS08095 (K3831_08095)	dppC	1721397..1722299 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K3831_RS08100 (K3831_08100)	amiE	1722310..1723293 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
K3831_RS08105 (K3831_08105)	dppF	1723290..1724294 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K3831_RS08110 (K3831_08110)	yhjV	1724324..1725595 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
K3831_RS08115 (K3831_08115)	ldrD	1726071..1726178 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
K3831_RS08120 (K3831_08120)	bcsG	1726265..1727944 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
K3831_RS08125 (K3831_08125)	bcsF	1727941..1728132 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=521543 K3831_RS08100 WP_001196486.1 1722310..1723293(+) (amiE) [Escherichia coli strain XL10-gold-ultracompetent]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=521543 K3831_RS08100 WP_001196486.1 1722310..1723293(+) (amiE) [Escherichia coli strain XL10-gold-ultracompetent]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404