Detailed information NTG0521483

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K3826_RS14385
• Genome accession: NZ_CP081007
• Coordinates: 3029161..3030186 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain XL1-Blue
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3024161..3035186

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3826_RS14355 (K3826_14355)	zapB	3024245..3024490 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K3826_RS14360 (K3826_14360)	rraA	3024575..3025060 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K3826_RS14365 (K3826_14365)	menA	3025153..3026079 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K3826_RS14370 (K3826_14370)	hslU	3026146..3027477 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
K3826_RS14375 (K3826_14375)	hslV	3027487..3028017 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K3826_RS14380 (K3826_14380)	ftsN	3028110..3029069 (-)	960	WP_000068828.1	cell division protein FtsN	-
K3826_RS14385 (K3826_14385)	cytR	3029161..3030186 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K3826_RS14390 (K3826_14390)	priA	3030342..3032540 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
K3826_RS14395 (K3826_14395)	rpmE	3032743..3032955 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K3826_RS14400 (K3826_14400)	yiiX	3033016..3033624 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
K3826_RS14405 (K3826_14405)	metJ	3033808..3034125 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=521483 K3826_RS14385 WP_000644904.1 3029161..3030186(-) (cytR) [Escherichia coli strain XL1-Blue]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=521483 K3826_RS14385 WP_000644904.1 3029161..3030186(-) (cytR) [Escherichia coli strain XL1-Blue]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628