Detailed information NTG0521467

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K3826_RS11090
• Genome accession: NZ_CP081007
• Coordinates: 2374809..2375792 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain XL1-Blue
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2369809..2380792

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3826_RS11065 (K3826_11065)	bcsF	2369970..2370161 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
K3826_RS11070 (K3826_11070)	bcsG	2370158..2371837 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
K3826_RS11075 (K3826_11075)	ldrD	2371924..2372031 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
K3826_RS11080 (K3826_11080)	yhjV	2372507..2373778 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
K3826_RS11085 (K3826_11085)	dppF	2373808..2374812 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K3826_RS11090 (K3826_11090)	amiE	2374809..2375792 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
K3826_RS11095 (K3826_11095)	dppC	2375803..2376705 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K3826_RS11100 (K3826_11100)	dppB	2376715..2377734 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K3826_RS11105 (K3826_11105)	dppA	2378042..2379649 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=521467 K3826_RS11090 WP_001196486.1 2374809..2375792(-) (amiE) [Escherichia coli strain XL1-Blue]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=521467 K3826_RS11090 WP_001196486.1 2374809..2375792(-) (amiE) [Escherichia coli strain XL1-Blue]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404