Detailed information NTG0521160

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K3F56_RS14210
• Genome accession: NZ_CP080620
• Coordinates: 2968279..2969304 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain TOP10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2963279..2974304

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3F56_RS14180 (K3F56_14180)	zapB	2963363..2963608 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K3F56_RS14185 (K3F56_14185)	rraA	2963693..2964178 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K3F56_RS14190 (K3F56_14190)	menA	2964271..2965197 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K3F56_RS14195 (K3F56_14195)	hslU	2965264..2966595 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
K3F56_RS14200 (K3F56_14200)	hslV	2966605..2967135 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K3F56_RS14205 (K3F56_14205)	ftsN	2967228..2968187 (-)	960	WP_000068828.1	cell division protein FtsN	-
K3F56_RS14210 (K3F56_14210)	cytR	2968279..2969304 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K3F56_RS14215 (K3F56_14215)	priA	2969460..2971658 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
K3F56_RS14220 (K3F56_14220)	rpmE	2971861..2972073 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K3F56_RS14225 (K3F56_14225)	yiiX	2972134..2972742 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
K3F56_RS14230 (K3F56_14230)	metJ	2972926..2973243 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=521160 K3F56_RS14210 WP_000644904.1 2968279..2969304(-) (cytR) [Escherichia coli strain TOP10]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=521160 K3F56_RS14210 WP_000644904.1 2968279..2969304(-) (cytR) [Escherichia coli strain TOP10]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628