Detailed information NTG0521145

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K3F56_RS11365
• Genome accession: NZ_CP080620
• Coordinates: 2402974..2403957 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain TOP10
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2397974..2408957

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3F56_RS11350 (K3F56_11350)	dppA	2399117..2400724 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
K3F56_RS11355 (K3F56_11355)	dppB	2401032..2402051 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K3F56_RS11360 (K3F56_11360)	dppC	2402061..2402963 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K3F56_RS11365 (K3F56_11365)	amiE	2402974..2403957 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
K3F56_RS11370 (K3F56_11370)	dppF	2403954..2404958 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K3F56_RS11375 (K3F56_11375)	yhjV	2404988..2406259 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
K3F56_RS11380 (K3F56_11380)	ldrD	2406735..2406842 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
K3F56_RS11385 (K3F56_11385)	bcsG	2406929..2408608 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
K3F56_RS11390 (K3F56_11390)	bcsF	2408605..2408796 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=521145 K3F56_RS11365 WP_001196486.1 2402974..2403957(+) (amiE) [Escherichia coli strain TOP10]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=521145 K3F56_RS11365 WP_001196486.1 2402974..2403957(+) (amiE) [Escherichia coli strain TOP10]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404