Detailed information NTG0052113

Bioinformatically predicted

Overview

• Name: rocC
• Type: Regulator
• Locus tag: LPO_RS00680
• Genome accession: NC_018139
• Coordinates: 153261..153953 (+)
• Length: 230 a.a.
• NCBI ID: WP_014840779.1
• Uniprot ID: A0AAV2UT33
• Organism: Legionella pneumophila subsp. pneumophila
• Function: rocR chaperone; repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 148261..158953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPO_RS00660 (LPO_0141)	dapB	150801..151532 (-)	732	WP_014840776.1	4-hydroxy-tetrahydrodipicolinate reductase	-
LPO_RS00665 (LPO_0142)	-	151711..151896 (-)	186	WP_011212782.1	hypothetical protein	-
LPO_RS00670 (LPO_0144)	-	152204..152662 (+)	459	Protein_132	hypothetical protein	-
LPO_RS00675 (LPO_0145)	-	152688..152980 (+)	293	Protein_133	GIY-YIG nuclease family protein	-
LPO_RS00680 (LPO_0146)	rocC	153261..153953 (+)	693	WP_014840779.1	ProQ/FinO family protein	Regulator
LPO_RS00685 (LPO_0147)	-	153954..155024 (+)	1071	WP_014840780.1	hypothetical protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 25838.72 Da
• Isoelectric Point: 10.6807

>NTDB_id=52113 LPO_RS00680 WP_014840779.1 153261..153953(+) (rocC) [Legionella pneumophila subsp. pneumophila]
MRKQALHPRTAVINKAQKNQSRRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGVSKSKLREAVVL
FTRRLDYLACLKAREVRIDLHGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSYVNNQPSTVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETTE

Nucleotide

• Length: 693 bp

>NTDB_id=52113 LPO_RS00680 WP_014840779.1 153261..153953(+) (rocC) [Legionella pneumophila subsp. pneumophila]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAGGCGCGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAGTTTCTAAAAGCAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAGCTCGTGAAGTCCGTATCGATTTGCACGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCACGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCATATGTAAATAATCAGCCAAGTACAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTAGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCTGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCGGAAGAGAAAAAGGAAACAACAGAGTAA

Domains

Predicted by InterproScan.

• ProQ/FINO family (ProQ) (26-132)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rocC	Legionella pneumophila str. Paris	98.696	100	0.987