Detailed information NTG0520946

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: JFL55_RS02170
• Genome accession: NZ_CP066564
• Coordinates: 458354..459460 (+)
• Length: 368 a.a.
• NCBI ID: WP_012341563.1
• Uniprot ID: -
• Organism: Histophilus somni strain ASc-MMNZ-VFA-69
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 453354..464460

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JFL55_RS02150 (JFL55_02150)	proA	454344..455600 (-)	1257	WP_012341559.1	glutamate-5-semialdehyde dehydrogenase	-
JFL55_RS02155 (JFL55_02155)	-	455610..456281 (-)	672	WP_012341560.1	trimeric intracellular cation channel family protein	-
JFL55_RS02160 (JFL55_02160)	-	456442..457029 (-)	588	WP_012341561.1	thymidine kinase	-
JFL55_RS02165 (JFL55_02165)	tsaD	457091..458119 (-)	1029	WP_012341562.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
JFL55_RS02170 (JFL55_02170)	dprA	458354..459460 (+)	1107	WP_012341563.1	DNA-processing protein DprA	Machinery gene
JFL55_RS02175 (JFL55_02175)	rsmD	459443..460045 (-)	603	WP_012341564.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
JFL55_RS02180 (JFL55_02180)	ftsY	460109..461452 (+)	1344	WP_012341565.1	signal recognition particle-docking protein FtsY	-
JFL55_RS02185 (JFL55_02185)	murJ	461614..463185 (-)	1572	WP_012341567.1	murein biosynthesis integral membrane protein MurJ	-
JFL55_RS02190 (JFL55_02190)	rpsT	463463..463726 (+)	264	WP_011608572.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41535.73 Da
• Isoelectric Point: 6.3669

>NTDB_id=520946 JFL55_RS02170 WP_012341563.1 458354..459460(+) (dprA) [Histophilus somni strain ASc-MMNZ-VFA-69]
MDNRNELLLRLLQVPKLGASGITQLLSHIDLKTLEDYDDVAFHYLGWKPEQINRWLYPDLRYIEPALFWASKKGHYLMNF
YQENYPYLLKQTIGAPPLLFIKGNPEILAQQQVAIVGSRHCSHYGEYWAKYFATELFLAGFVITSGLALGIDGFCHQAVV
DIQGQTIGVLGGGLEELYPKQHKKLAQQMLDYGGALVSEFLPHQPPKPQHFPQRNRIISGLSKGVLVVEATEKSGSLITA
RYALEQNREVFALPGQIQNEYSQGCHRLIKDGALLVENVADIVENLSPFMHYERQLTAKQIETQFPPAYKLPASPTYPEL
YAHIGYTPVGLDELSNKSGLSVDTLLIQLLELELQDLVIAEKGLYRRT

Nucleotide

• Length: 1107 bp

>NTDB_id=520946 JFL55_RS02170 WP_012341563.1 458354..459460(+) (dprA) [Histophilus somni strain ASc-MMNZ-VFA-69]
ATGGATAACCGGAATGAGCTGTTACTGCGTTTGTTACAAGTGCCGAAGTTGGGAGCGTCCGGAATAACTCAACTTTTATC
GCACATCGATTTAAAAACATTAGAGGATTATGATGATGTTGCGTTTCATTATTTAGGCTGGAAACCTGAACAGATAAATA
GGTGGTTGTATCCGGATCTTAGATATATTGAACCTGCATTATTTTGGGCAAGCAAAAAGGGACATTATTTGATGAATTTT
TATCAAGAGAATTACCCTTATTTATTAAAGCAAACCATAGGTGCTCCCCCTTTGTTATTTATCAAAGGCAATCCGGAAAT
ACTTGCTCAACAACAAGTTGCTATTGTAGGAAGCCGTCATTGCTCACATTATGGCGAGTATTGGGCAAAGTATTTTGCAA
CGGAATTGTTCCTTGCTGGTTTTGTTATTACCAGTGGACTGGCTTTAGGGATAGACGGTTTTTGTCATCAGGCTGTTGTG
GATATTCAAGGACAAACTATCGGGGTATTAGGGGGAGGTTTGGAAGAGTTGTATCCCAAACAACATAAAAAATTAGCACA
ACAAATGCTAGATTATGGCGGTGCGTTAGTGTCAGAATTTTTACCTCATCAGCCTCCCAAGCCACAACATTTTCCTCAAC
GTAATCGCATTATTAGCGGACTTTCTAAAGGTGTTTTAGTGGTTGAGGCAACAGAAAAAAGCGGTTCACTCATTACTGCA
CGTTATGCTTTAGAACAAAATAGAGAAGTTTTTGCACTTCCGGGGCAAATTCAAAATGAGTATAGTCAAGGGTGTCATAG
ATTAATAAAAGACGGTGCATTGTTAGTAGAGAATGTTGCAGATATTGTAGAAAATTTATCGCCTTTTATGCATTATGAAC
GTCAACTAACAGCAAAACAGATAGAAACGCAATTTCCGCCGGCTTATAAGTTACCTGCTTCACCGACTTATCCTGAACTC
TATGCCCATATTGGATATACGCCGGTAGGGCTTGATGAATTATCAAATAAAAGCGGATTAAGTGTAGATACCTTATTGAT
ACAGCTGTTAGAACTTGAATTGCAAGATCTCGTTATTGCTGAAAAAGGGTTATATCGACGGACTTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (310-361)

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.126	100	0.62
dprA	Glaesserella parasuis strain SC1401	50.432	94.293	0.476
dprA	Vibrio cholerae strain A1552	44.986	100	0.451
dprA	Vibrio campbellii strain DS40M4	41.096	99.185	0.408
dprA	Legionella pneumophila strain ERS1305867	41.176	87.772	0.361