Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   JF649_RS08415 Genome accession   NZ_CP066541
Coordinates   1713780..1714493 (+) Length   237 a.a.
NCBI ID   WP_129322328.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain MGAS270     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1708780..1719493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JF649_RS08405 (JF649_08390) treC 1709849..1711477 (-) 1629 WP_063633032.1 alpha,alpha-phosphotrehalase -
  JF649_RS08410 (JF649_08395) treP 1711545..1713569 (-) 2025 WP_129322326.1 PTS system trehalose-specific EIIBC component -
  JF649_RS08415 (JF649_08400) treR 1713780..1714493 (+) 714 WP_129322328.1 trehalose operon repressor Regulator
  JF649_RS08420 (JF649_08405) - 1714771..1715109 (-) 339 WP_129322330.1 helix-turn-helix domain-containing protein -
  JF649_RS08425 (JF649_08410) - 1715296..1716152 (+) 857 Protein_1607 VOC family protein -
  JF649_RS08430 (JF649_08415) yaaA 1716194..1716925 (+) 732 WP_023079177.1 peroxide stress protein YaaA -
  JF649_RS08435 (JF649_08420) nrdG 1717099..1717713 (-) 615 WP_129322333.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  JF649_RS08440 (JF649_08425) - 1717713..1718222 (-) 510 WP_011018311.1 GNAT family N-acetyltransferase -
  JF649_RS08445 (JF649_08430) - 1718231..1719166 (-) 936 WP_129322335.1 Gfo/Idh/MocA family oxidoreductase -
  JF649_RS08450 (JF649_08435) - 1719195..1719341 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27622.81 Da        Isoelectric Point: 9.6226

>NTDB_id=520710 JF649_RS08415 WP_129322328.1 1713780..1714493(+) (treR) [Streptococcus pyogenes strain MGAS270]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLTIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=520710 JF649_RS08415 WP_129322328.1 1713780..1714493(+) (treR) [Streptococcus pyogenes strain MGAS270]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCACCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAGCATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679