Detailed information NTG0520562

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: JEQ22_RS18105
• Genome accession: NZ_CP066501
• Coordinates: 3630901..3632046 (+)
• Length: 381 a.a.
• NCBI ID: WP_017418708.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain ID-A02
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3625901..3637046

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JEQ22_RS18085 (JEQ22_17975)	fnr	3626375..3627091 (-)	717	WP_017418713.1	fumarate/nitrate reduction transcriptional regulator Fnr	-
JEQ22_RS18090 (JEQ22_17980)	narK	3627189..3628379 (-)	1191	WP_017418712.1	nitrate transporter NarK	-
JEQ22_RS18095 (JEQ22_17985)	argS	3628514..3630184 (-)	1671	WP_025649385.1	arginine--tRNA ligase	-
JEQ22_RS18100 (JEQ22_17990)	-	3630181..3630609 (-)	429	WP_014419128.1	DUF1934 family protein	-
JEQ22_RS18105 (JEQ22_17995)	rapF	3630901..3632046 (+)	1146	WP_017418708.1	tetratricopeptide repeat protein	Regulator
JEQ22_RS18110 (JEQ22_18000)	-	3632030..3632149 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
JEQ22_RS18115 (JEQ22_18005)	speB	3632272..3633144 (-)	873	WP_003151054.1	agmatinase	-
JEQ22_RS18120 (JEQ22_18010)	speE	3633204..3634034 (-)	831	WP_017418706.1	spermidine synthase	-
JEQ22_RS18125 (JEQ22_18015)	-	3634234..3636306 (+)	2073	WP_017418705.1	transglycosylase domain-containing protein	-
JEQ22_RS18130 (JEQ22_18020)	-	3636331..3636762 (-)	432	WP_017418704.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0722

>NTDB_id=520562 JEQ22_RS18105 WP_017418708.1 3630901..3632046(+) (rapF) [Bacillus velezensis strain ID-A02]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=520562 JEQ22_RS18105 WP_017418708.1 3630901..3632046(+) (rapF) [Bacillus velezensis strain ID-A02]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533