Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   JEQ22_RS01790 Genome accession   NZ_CP066501
Coordinates   349178..349342 (+) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain ID-A02     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 344178..354342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JEQ22_RS01785 srfAB 346066..349161 (+) 3096 Protein_311 surfactin non-ribosomal peptide synthetase SrfAB -
  JEQ22_RS01790 comS 349178..349342 (+) 165 WP_269195014.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=520498 JEQ22_RS01790 WP_269195014.1 349178..349342(+) (comS) [Bacillus velezensis strain ID-A02]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=520498 JEQ22_RS01790 WP_269195014.1 349178..349342(+) (comS) [Bacillus velezensis strain ID-A02]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5