Detailed information    

insolico Bioinformatically predicted

Overview

Name   scnK   Type   Regulator
Locus tag   SMUGS5_RS05135 Genome accession   NC_018089
Coordinates   1068677..1069984 (-) Length   435 a.a.
NCBI ID   WP_014834981.1    Uniprot ID   -
Organism   Streptococcus mutans GS-5     
Function   regulate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1063677..1074984
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUGS5_RS05105 (SMUGS5_05060) - 1063868..1065172 (-) 1305 WP_002280151.1 RsmF rRNA methyltransferase first C-terminal domain-containing protein -
  SMUGS5_RS05110 (SMUGS5_05065) - 1065236..1065994 (-) 759 WP_002266790.1 inositol monophosphatase family protein -
  SMUGS5_RS05115 (SMUGS5_05070) - 1065984..1066262 (-) 279 WP_002266791.1 UPF0223 family protein -
  SMUGS5_RS05120 (SMUGS5_05075) spx 1066255..1066668 (-) 414 WP_002263835.1 transcriptional regulator Spx -
  SMUGS5_RS05125 (SMUGS5_05080) - 1066729..1067649 (-) 921 WP_002262201.1 bifunctional riboflavin kinase/FAD synthetase -
  SMUGS5_RS05130 (SMUGS5_05085) truB 1067680..1068560 (-) 881 Protein_1000 tRNA pseudouridine(55) synthase TruB -
  SMUGS5_RS05135 (SMUGS5_05090) scnK 1068677..1069984 (-) 1308 WP_014834981.1 sensor histidine kinase Regulator
  SMUGS5_RS05140 (SMUGS5_05095) scnR 1069985..1070674 (-) 690 WP_002272187.1 response regulator transcription factor Regulator
  SMUGS5_RS05145 (SMUGS5_05100) - 1070849..1071757 (+) 909 WP_002293311.1 ABC transporter ATP-binding protein -
  SMUGS5_RS05150 (SMUGS5_05105) - 1071757..1072497 (+) 741 WP_014834982.1 ABC transporter permease -
  SMUGS5_RS05155 (SMUGS5_05110) - 1072494..1073222 (+) 729 WP_002279688.1 ABC transporter permease -
  SMUGS5_RS05160 (SMUGS5_05115) - 1073350..1074714 (-) 1365 WP_002279689.1 DUF438 domain-containing protein -
  SMUGS5_RS05165 (SMUGS5_05120) - 1074714..1074947 (-) 234 WP_002262193.1 DUF1858 domain-containing protein -

Sequence

Protein


Download         Length: 435 a.a.        Molecular weight: 50059.07 Da        Isoelectric Point: 9.7500

>NTDB_id=52034 SMUGS5_RS05135 WP_014834981.1 1068677..1069984(-) (scnK) [Streptococcus mutans GS-5]
MDTVKFFTKLLTKYVLLVFALIVGVIFVYGLVFLTYLNYYGKEKPELVYTKIARSSQQDAFNISKRSQKEMDKQKTWAMV
LNQDGQIVQSYRLPQQLKRHYTNADMVKFSRWYLDDYPVFSYVRGQQILVFGYPKKYSLAKFNFYLNTQFIKNFLHLGFV
FLGIIFLFIFVLFSRSKLRIKKEIEPIVSALTFLSQGQSAALNEKGNLSEIKTALNETSHILEESNMMKEQWIRGVSHDL
RNPLMLISGYTSQLEQQYGHGKQTEQIENQIQNMKEMISNLNLSYLLDNQKRHSKFSSLDLAVVLRSVIADILNNYETVI
LHFDLPAEAVLVKGDATLLERAFRNLLLNSIKHSGSNQIDLTYQLFDNKVIIIIADKGTITAQKIVELNQKSTNYESHGM
GTVITKQIIKLHQGETVFSDNHPGLKVTIVLPCNG

Nucleotide


Download         Length: 1308 bp        

>NTDB_id=52034 SMUGS5_RS05135 WP_014834981.1 1068677..1069984(-) (scnK) [Streptococcus mutans GS-5]
ATGGATACCGTTAAATTTTTTACGAAGTTATTGACCAAGTATGTTCTATTAGTATTTGCCTTAATTGTAGGAGTTATTTT
TGTTTATGGCTTGGTTTTCTTAACCTATCTTAATTATTATGGAAAGGAAAAACCAGAGCTAGTTTACACCAAAATTGCTC
GATCGAGTCAACAAGATGCGTTCAATATTAGTAAAAGAAGTCAAAAAGAAATGGATAAACAAAAGACTTGGGCTATGGTA
TTAAATCAAGATGGTCAGATCGTCCAATCTTATCGTTTACCTCAACAGCTCAAAAGACATTATACCAATGCTGATATGGT
GAAATTTTCGCGCTGGTATTTAGATGATTATCCTGTTTTTTCCTATGTACGTGGTCAGCAGATTTTAGTTTTTGGCTACC
CTAAAAAGTATTCCCTAGCAAAGTTTAATTTTTATCTGAATACGCAATTTATTAAGAATTTTCTTCATTTAGGGTTTGTT
TTCTTAGGCATCATCTTTTTATTTATCTTTGTTCTTTTTAGTCGTTCAAAGCTGCGCATTAAAAAGGAAATAGAGCCGAT
TGTCTCTGCGCTCACTTTCTTGTCGCAAGGTCAAAGTGCTGCTCTTAATGAAAAAGGCAATCTTTCTGAAATTAAGACAG
CTCTCAATGAAACTTCTCATATTTTAGAAGAAAGTAATATGATGAAAGAACAGTGGATTAGAGGAGTCAGTCACGATTTG
CGCAACCCGCTGATGCTGATTTCAGGCTACACCAGTCAATTGGAACAACAATATGGTCATGGAAAGCAAACGGAGCAGAT
TGAAAATCAGATTCAAAATATGAAAGAAATGATTTCTAATCTCAATTTGAGCTACCTGTTGGATAATCAAAAGCGTCATT
CCAAATTTTCAAGCCTTGATTTAGCTGTTGTTCTGCGATCCGTAATTGCTGATATTCTAAATAATTATGAAACAGTTATA
CTTCATTTTGATTTACCTGCAGAGGCGGTATTGGTAAAGGGTGATGCCACTTTATTAGAAAGGGCTTTTAGAAATCTTCT
GCTCAATAGTATTAAGCATAGTGGCTCTAATCAGATCGATTTGACTTATCAATTATTTGATAATAAAGTGATTATTATCA
TTGCAGATAAGGGAACTATTACAGCTCAGAAAATTGTAGAACTAAATCAAAAATCAACTAATTATGAGTCGCATGGCATG
GGCACCGTTATCACTAAGCAAATCATAAAACTTCATCAAGGTGAGACTGTCTTTTCAGATAATCATCCAGGTTTGAAAGT
GACGATTGTCTTGCCCTGTAACGGATGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(334-432)

His Kinase A (phospho-acceptor) domain (HisKA)

(228-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  scnK Streptococcus mutans UA159

98.845

99.54

0.984

Multiple sequence alignment