Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SMUGS5_RS01880 Genome accession   NC_018089
Coordinates   377121..377846 (+) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans GS-5     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 372121..382846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUGS5_RS01855 (SMUGS5_01765) - 372624..374054 (+) 1431 WP_014834851.1 NCS2 family permease -
  SMUGS5_RS01860 (SMUGS5_01770) tsaE 374183..374626 (+) 444 WP_002268779.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SMUGS5_RS01865 (SMUGS5_01775) brpA 374957..376177 (+) 1221 WP_002262611.1 biofilm formation/cell division transcriptional regulator BrpA -
  SMUGS5_RS01870 (SMUGS5_01780) - 376347..376640 (-) 294 WP_014834852.1 hypothetical protein -
  SMUGS5_RS01875 (SMUGS5_01785) - 376637..377056 (-) 420 WP_002262609.1 HIT family protein -
  SMUGS5_RS01880 (SMUGS5_01790) pptA 377121..377846 (+) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  SMUGS5_RS01885 (SMUGS5_01795) pptB 377849..378883 (+) 1035 WP_002271784.1 ABC transporter permease Regulator
  SMUGS5_RS01890 (SMUGS5_01800) ccrZ 378942..379724 (+) 783 WP_002273963.1 cell cycle regulator CcrZ -
  SMUGS5_RS01895 (SMUGS5_01805) trmB 379734..380369 (+) 636 WP_002265651.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SMUGS5_RS01905 (SMUGS5_01810) rimP 380641..381132 (+) 492 WP_014834853.1 ribosome maturation factor RimP -
  SMUGS5_RS01910 (SMUGS5_01815) nusA 381168..382361 (+) 1194 WP_002262603.1 transcription termination factor NusA -
  SMUGS5_RS01915 (SMUGS5_01820) rnpM 382379..382675 (+) 297 WP_002263922.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=52014 SMUGS5_RS01880 WP_002262608.1 377121..377846(+) (pptA) [Streptococcus mutans GS-5]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=52014 SMUGS5_RS01880 WP_002262608.1 377121..377846(+) (pptA) [Streptococcus mutans GS-5]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACACCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAGATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCTTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759

Multiple sequence alignment