Detailed information NTG0520116

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: K1T67_RS02775
• Genome accession: NZ_CP080511
• Coordinates: 595229..596254 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain DJ06
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 590229..601254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K1T67_RS02750 (K1T67_02750)	aroE	590431..591255 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
K1T67_RS02755 (K1T67_02755)	hemF	591313..592230 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
K1T67_RS02760 (K1T67_02760)	-	592421..593398 (+)	978	WP_179118816.1	NADPH:quinone reductase	-
K1T67_RS02765 (K1T67_02765)	-	593408..593965 (-)	558	WP_016561457.1	L-threonylcarbamoyladenylate synthase	-
K1T67_RS02770 (K1T67_02770)	dprA	594006..595094 (-)	1089	WP_031640954.1	DNA-processing protein DprA	Machinery gene
K1T67_RS02775 (K1T67_02775)	tsaP	595229..596254 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
K1T67_RS02780 (K1T67_02780)	def	596393..596899 (+)	507	WP_003107059.1	peptide deformylase	-
K1T67_RS02785 (K1T67_02785)	fmt	596954..597898 (+)	945	WP_003123763.1	methionyl-tRNA formyltransferase	-
K1T67_RS02790 (K1T67_02790)	rsmB	597895..599199 (+)	1305	WP_003118477.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
K1T67_RS02795 (K1T67_02795)	trkA	599227..600600 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
K1T67_RS02800 (K1T67_02800)	-	600749..601066 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=520116 K1T67_RS02775 WP_003097294.1 595229..596254(-) (tsaP) [Pseudomonas aeruginosa strain DJ06]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=520116 K1T67_RS02775 WP_003097294.1 595229..596254(-) (tsaP) [Pseudomonas aeruginosa strain DJ06]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393