Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   K0V03_RS20720 Genome accession   NZ_CP080508
Coordinates   3894660..3895277 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain HD15     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3889660..3900277
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K0V03_RS20695 (K0V03_20695) yndJ 3889979..3891619 (+) 1641 WP_085187672.1 YndJ family protein -
  K0V03_RS20700 (K0V03_20700) - 3891707..3892021 (+) 315 WP_170948349.1 hypothetical protein -
  K0V03_RS20705 (K0V03_20705) pghL 3892247..3893005 (+) 759 WP_085187666.1 gamma-polyglutamate hydrolase PghL -
  K0V03_RS20710 (K0V03_20710) - 3893032..3893481 (-) 450 WP_015483284.1 YndM family protein -
  K0V03_RS20715 (K0V03_20715) fosB 3893688..3894122 (+) 435 WP_085187663.1 metallothiol transferase FosB -
  K0V03_RS22390 - 3894031..3894289 (+) 259 Protein_4063 hypothetical protein -
  K0V03_RS20720 (K0V03_20720) dinR/lexA 3894660..3895277 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  K0V03_RS20725 (K0V03_20725) yneA 3895427..3895744 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  K0V03_RS20730 (K0V03_20730) dinL 3895763..3896416 (+) 654 WP_015714011.1 recombinase family protein -
  K0V03_RS20735 (K0V03_20735) ynzC 3896480..3896713 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  K0V03_RS20740 (K0V03_20740) recP/tkt 3896882..3898885 (+) 2004 WP_097080604.1 transketolase Machinery gene
  K0V03_RS20745 (K0V03_20745) sirA 3899038..3899484 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  K0V03_RS20750 (K0V03_20750) yneF 3899570..3899788 (+) 219 WP_003221221.1 YneF family protein -
  K0V03_RS20755 (K0V03_20755) ynzD 3899862..3900035 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=520100 K0V03_RS20720 WP_003238209.1 3894660..3895277(-) (dinR/lexA) [Bacillus subtilis strain HD15]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=520100 K0V03_RS20720 WP_003238209.1 3894660..3895277(-) (dinR/lexA) [Bacillus subtilis strain HD15]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1