Detailed information NTG0519944

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K0819_RS14590
• Genome accession: NZ_CP080478
• Coordinates: 3068103..3069110 (+)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain Vp2015094
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3063103..3074110

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K0819_RS14570 (K0819_14505)	rplC	3063637..3064266 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
K0819_RS14575 (K0819_14510)	rpsJ	3064281..3064592 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
K0819_RS14580 (K0819_14515)	rpmE	3065050..3065271 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
K0819_RS14585 (K0819_14520)	priA	3065566..3067770 (+)	2205	WP_140194603.1	primosomal protein N'	Machinery gene
K0819_RS14590 (K0819_14525)	cytR	3068103..3069110 (+)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
K0819_RS14595 (K0819_14530)	ftsN	3069286..3069831 (+)	546	WP_005481405.1	cell division protein FtsN	-
K0819_RS14600 (K0819_14535)	hslV	3069996..3070547 (+)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
K0819_RS14605 (K0819_14540)	hslU	3070571..3071902 (+)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
K0819_RS14610 (K0819_14545)	-	3072087..3073004 (+)	918	WP_005457195.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K0819_RS14615 (K0819_14550)	rraA	3073081..3073593 (+)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
K0819_RS14620 (K0819_14555)	zapB	3073698..3073940 (-)	243	WP_005481417.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=519944 K0819_RS14590 WP_005481416.1 3068103..3069110(+) (cytR) [Vibrio parahaemolyticus strain Vp2015094]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=519944 K0819_RS14590 WP_005481416.1 3068103..3069110(+) (cytR) [Vibrio parahaemolyticus strain Vp2015094]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGTACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCGGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GTGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGCGACACCATGGCAATCGGCGCAATCCAAGAAGCCAAACGACTCGGTCTGCGCGTTCCGCAAGATTT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTACTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904