Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JEQ25_RS08115 Genome accession   NZ_CP066380
Coordinates   1508867..1509442 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain ID-A05     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1503867..1514442
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JEQ25_RS08085 (JEQ25_08020) dapD 1504055..1504765 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  JEQ25_RS08090 (JEQ25_08025) dapI 1504835..1505959 (+) 1125 WP_046380993.1 N-acetyldiaminopimelate deacetylase -
  JEQ25_RS08095 (JEQ25_08030) ykuS 1506021..1506266 (+) 246 WP_003232382.1 YkuS family protein -
  JEQ25_RS08100 (JEQ25_08035) mscT 1506303..1507106 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  JEQ25_RS08105 (JEQ25_08040) ahpA 1507343..1507885 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  JEQ25_RS08110 (JEQ25_08045) ykuV 1507955..1508401 (+) 447 WP_024571971.1 thiol-disulfide oxidoreductase YkuV -
  JEQ25_RS08115 (JEQ25_08050) rok 1508867..1509442 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  JEQ25_RS08120 (JEQ25_08055) cse15 1509483..1510448 (-) 966 WP_024571970.1 spore protein Cse15 -
  JEQ25_RS08125 (JEQ25_08060) mobA 1510585..1511184 (+) 600 WP_024571969.1 molybdenum cofactor guanylyltransferase -
  JEQ25_RS08130 (JEQ25_08065) moeB 1511235..1512254 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  JEQ25_RS08135 (JEQ25_08070) glp 1512272..1513564 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  JEQ25_RS08140 (JEQ25_08075) mobB 1513525..1514046 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=519817 JEQ25_RS08115 WP_003232378.1 1508867..1509442(+) (rok) [Bacillus subtilis strain ID-A05]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=519817 JEQ25_RS08115 WP_003232378.1 1508867..1509442(+) (rok) [Bacillus subtilis strain ID-A05]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1