Detailed information NTG0519807

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: JEQ25_RS06520
• Genome accession: NZ_CP066380
• Coordinates: 1224934..1225887 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis strain ID-A05
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1219934..1230887

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JEQ25_RS06495 (JEQ25_06440)	argF	1221766..1222725 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
JEQ25_RS06500 (JEQ25_06445)	yjzC	1222811..1222990 (+)	180	WP_003245356.1	YjzC family protein	-
JEQ25_RS06505 (JEQ25_06450)	yjzD	1223036..1223221 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
JEQ25_RS06510 (JEQ25_06455)	-	1223470..1224204 (+)	735	WP_014479433.1	hypothetical protein	-
JEQ25_RS06515 (JEQ25_06460)	-	1224286..1224843 (+)	558	WP_014479435.1	hypothetical protein	-
JEQ25_RS06520 (JEQ25_06465)	med	1224934..1225887 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
JEQ25_RS06525 (JEQ25_06470)	comZ	1225902..1226093 (+)	192	WP_046380930.1	ComG operon transcriptional repressor ComZ	Regulator
JEQ25_RS06530 (JEQ25_06475)	yjzB	1226123..1226362 (-)	240	WP_003232972.1	spore coat protein YjzB	-
JEQ25_RS06535 (JEQ25_06480)	fabH	1226527..1227465 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
JEQ25_RS06540 (JEQ25_06485)	fabF	1227488..1228729 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
JEQ25_RS06545 (JEQ25_06490)	yjaZ	1228805..1229590 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
JEQ25_RS06550 (JEQ25_06495)	appD	1229782..1230768 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=519807 JEQ25_RS06520 WP_003245494.1 1224934..1225887(+) (med) [Bacillus subtilis strain ID-A05]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=519807 JEQ25_RS06520 WP_003245494.1 1224934..1225887(+) (med) [Bacillus subtilis strain ID-A05]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1