Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JEQ25_RS04990 Genome accession   NZ_CP066380
Coordinates   942509..943303 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain ID-A05     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 937509..948303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JEQ25_RS04960 (JEQ25_04905) sxzA 938348..939379 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  JEQ25_RS04965 (JEQ25_04910) yfhB 939494..940375 (+) 882 WP_046380867.1 PhzF family phenazine biosynthesis isomerase -
  JEQ25_RS04970 (JEQ25_04915) yfhC 940463..941047 (+) 585 WP_032723010.1 nitroreductase -
  JEQ25_RS04975 (JEQ25_04920) yfhD 941086..941277 (-) 192 WP_003233561.1 YfhD family protein -
  JEQ25_RS04980 (JEQ25_04925) yfhE 941344..941454 (-) 111 WP_003223230.1 YfhE family protein -
  JEQ25_RS04985 (JEQ25_04930) yfhF 941509..942420 (-) 912 WP_033883295.1 TIGR01777 family oxidoreductase -
  JEQ25_RS04990 (JEQ25_04935) recX 942509..943303 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  JEQ25_RS04995 (JEQ25_04940) yfhH 943305..943619 (+) 315 WP_003244592.1 YfhH family protein -
  JEQ25_RS05000 (JEQ25_04945) yfhI 943762..944955 (+) 1194 WP_003243500.1 MFS transporter -
  JEQ25_RS05005 (JEQ25_04950) sspK 944987..945139 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  JEQ25_RS05010 (JEQ25_04955) yfhJ 945264..945533 (+) 270 WP_015252516.1 YfhJ family protein -
  JEQ25_RS05015 (JEQ25_04960) yfhK 945678..946196 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  JEQ25_RS05020 (JEQ25_04965) spdL 946281..946598 (+) 318 WP_038428649.1 SdpC immunity protein SpdL -
  JEQ25_RS05025 (JEQ25_04970) ephM 946600..947460 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=519799 JEQ25_RS04990 WP_029726844.1 942509..943303(+) (recX) [Bacillus subtilis strain ID-A05]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=519799 JEQ25_RS04990 WP_029726844.1 942509..943303(+) (recX) [Bacillus subtilis strain ID-A05]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996