Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   JEQ24_RS06390 Genome accession   NZ_CP066379
Coordinates   1209809..1210000 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain ID-A04     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1204809..1215000
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JEQ24_RS06360 (JEQ24_06295) argF 1205660..1206631 (+) 972 WP_022553565.1 ornithine carbamoyltransferase -
  JEQ24_RS06365 (JEQ24_06300) - 1206707..1206886 (+) 180 WP_003155070.1 YjzC family protein -
  JEQ24_RS06370 (JEQ24_06305) - 1206923..1207108 (-) 186 WP_007409129.1 YjzD family protein -
  JEQ24_RS06375 (JEQ24_06310) - 1207369..1208103 (+) 735 WP_022553564.1 hypothetical protein -
  JEQ24_RS06380 (JEQ24_06315) - 1208186..1208752 (+) 567 WP_032863798.1 hypothetical protein -
  JEQ24_RS06385 (JEQ24_06320) med 1208843..1209796 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  JEQ24_RS06390 (JEQ24_06325) comZ 1209809..1210000 (+) 192 WP_003155061.1 ComZ family protein Regulator
  JEQ24_RS06395 (JEQ24_06330) - 1210029..1210247 (-) 219 WP_007409123.1 hypothetical protein -
  JEQ24_RS06400 (JEQ24_06335) - 1210414..1211352 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  JEQ24_RS06405 (JEQ24_06340) fabF 1211375..1212613 (+) 1239 WP_022553563.1 beta-ketoacyl-ACP synthase II -
  JEQ24_RS06410 (JEQ24_06345) - 1212696..1213481 (+) 786 WP_022553562.1 DUF2268 domain-containing protein -
  JEQ24_RS06415 (JEQ24_06350) - 1213655..1214641 (+) 987 WP_022553561.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=519727 JEQ24_RS06390 WP_003155061.1 1209809..1210000(+) (comZ) [Bacillus velezensis strain ID-A04]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=519727 JEQ24_RS06390 WP_003155061.1 1209809..1210000(+) (comZ) [Bacillus velezensis strain ID-A04]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCATATGAGCTTG
GCAGATCTGATGCCGGAGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794