Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   JEQ16_RS11625 Genome accession   NZ_CP066377
Coordinates   2411786..2412586 (-) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain ID-A01     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2406786..2417586
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JEQ16_RS11595 (JEQ16_11535) - 2407331..2407963 (+) 633 WP_278071161.1 helix-turn-helix domain-containing protein -
  JEQ16_RS11600 (JEQ16_11540) - 2408254..2408391 (+) 138 WP_014470646.1 hypothetical protein -
  JEQ16_RS11605 (JEQ16_11545) - 2408485..2409603 (+) 1119 WP_003153184.1 NADH-dependent flavin oxidoreductase -
  JEQ16_RS11610 (JEQ16_11550) - 2409730..2409942 (+) 213 WP_003153183.1 spore germination protein -
  JEQ16_RS11615 (JEQ16_11555) - 2410069..2410281 (+) 213 WP_003153181.1 spore germination protein -
  JEQ16_RS11620 (JEQ16_11560) alr 2410457..2411638 (+) 1182 WP_278071162.1 alanine racemase -
  JEQ16_RS11625 (JEQ16_11565) spo0A 2411786..2412586 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  JEQ16_RS11630 (JEQ16_11570) spoIVB 2412867..2414147 (-) 1281 WP_278071163.1 SpoIVB peptidase -
  JEQ16_RS11635 (JEQ16_11575) recN 2414311..2416041 (-) 1731 WP_202735625.1 DNA repair protein RecN Machinery gene
  JEQ16_RS11640 (JEQ16_11580) argR 2416073..2416522 (-) 450 WP_003153173.1 transcriptional regulator ArgR -
  JEQ16_RS11645 (JEQ16_11585) - 2416617..2417462 (-) 846 WP_003153172.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=519591 JEQ16_RS11625 WP_003153177.1 2411786..2412586(-) (spo0A) [Bacillus velezensis strain ID-A01]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=519591 JEQ16_RS11625 WP_003153177.1 2411786..2412586(-) (spo0A) [Bacillus velezensis strain ID-A01]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCCGATGTGCTCG
TGTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGTGAATCAGAGCTCGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATTCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCCGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGGTATACCGTAAGC
ATGACAAAAGCAAAACCAACCAACTCGGAGTTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97