Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JEQ16_RS07345 Genome accession   NZ_CP066377
Coordinates   1388916..1389512 (+) Length   198 a.a.
NCBI ID   WP_070081746.1    Uniprot ID   -
Organism   Bacillus velezensis strain ID-A01     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1383916..1394512
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JEQ16_RS07315 (JEQ16_07265) - 1384131..1384586 (+) 456 WP_094246983.1 flavodoxin -
  JEQ16_RS07320 (JEQ16_07270) dapD 1384668..1385378 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  JEQ16_RS07325 (JEQ16_07275) - 1385449..1386573 (+) 1125 WP_070081744.1 N-acetyldiaminopimelate deacetylase -
  JEQ16_RS07330 (JEQ16_07280) - 1386634..1386879 (+) 246 WP_003154596.1 YkuS family protein -
  JEQ16_RS07335 (JEQ16_07285) - 1386913..1387719 (-) 807 WP_060386912.1 mechanosensitive ion channel family protein -
  JEQ16_RS07340 (JEQ16_07290) - 1388007..1388465 (+) 459 WP_070081745.1 redoxin domain-containing protein -
  JEQ16_RS07345 (JEQ16_07295) rok 1388916..1389512 (+) 597 WP_070081746.1 transcriptional regulator Rok Regulator
  JEQ16_RS07350 (JEQ16_07300) - 1389533..1390525 (-) 993 WP_069473386.1 sporulation protein -
  JEQ16_RS07355 (JEQ16_07305) - 1390671..1391273 (+) 603 WP_077722144.1 molybdenum cofactor guanylyltransferase -
  JEQ16_RS07360 (JEQ16_07310) - 1391325..1392344 (+) 1020 WP_003154586.1 molybdopterin-synthase adenylyltransferase MoeB -
  JEQ16_RS07365 (JEQ16_07315) glp 1392362..1393654 (+) 1293 WP_278071800.1 gephyrin-like molybdotransferase Glp -
  JEQ16_RS07370 (JEQ16_07320) mobB 1393615..1394136 (+) 522 WP_041482361.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22583.61 Da        Isoelectric Point: 9.6909

>NTDB_id=519583 JEQ16_RS07345 WP_070081746.1 1388916..1389512(+) (rok) [Bacillus velezensis strain ID-A01]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKNDSLPVLAELAAQEMRSYQKPQ
TQPQSSQQQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=519583 JEQ16_RS07345 WP_070081746.1 1388916..1389512(+) (rok) [Bacillus velezensis strain ID-A01]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAATGACTCCCTCCCGGTACTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCAGCAGATGCAGTCTATTACGTCTCTTCCCGCAGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCGAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

87.629

97.98

0.859