Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   JEQ16_RS07245 Genome accession   NZ_CP066377
Coordinates   1373053..1373517 (-) Length   154 a.a.
NCBI ID   WP_278071798.1    Uniprot ID   -
Organism   Bacillus velezensis strain ID-A01     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1368053..1378517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JEQ16_RS07225 (JEQ16_07175) - 1368533..1370353 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  JEQ16_RS07230 (JEQ16_07180) - 1370379..1371548 (-) 1170 WP_007611083.1 aminotransferase A -
  JEQ16_RS07235 (JEQ16_07185) - 1371749..1371910 (-) 162 WP_164672396.1 hypothetical protein -
  JEQ16_RS07240 (JEQ16_07190) cheV 1372099..1373010 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  JEQ16_RS07245 (JEQ16_07195) kre 1373053..1373517 (-) 465 WP_278071798.1 YkyB family protein Regulator
  JEQ16_RS07250 (JEQ16_07200) - 1373640..1374932 (-) 1293 WP_003154621.1 MFS transporter -
  JEQ16_RS07255 (JEQ16_07205) - 1375008..1375502 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  JEQ16_RS07260 (JEQ16_07210) - 1375577..1376440 (-) 864 WP_146283576.1 metallophosphoesterase -
  JEQ16_RS07265 (JEQ16_07215) fadH 1376584..1377348 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  JEQ16_RS07270 (JEQ16_07220) - 1377459..1378007 (+) 549 Protein_1376 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17824.57 Da        Isoelectric Point: 10.4864

>NTDB_id=519582 JEQ16_RS07245 WP_278071798.1 1373053..1373517(-) (kre) [Bacillus velezensis strain ID-A01]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKHVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=519582 JEQ16_RS07245 WP_278071798.1 1373053..1373517(-) (kre) [Bacillus velezensis strain ID-A01]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCGCAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACACGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.208

100

0.922