Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JFU10_RS17755 Genome accession   NZ_CP066337
Coordinates   3537970..3538566 (+) Length   198 a.a.
NCBI ID   WP_070081746.1    Uniprot ID   -
Organism   Bacillus velezensis strain Mr12     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3532970..3543566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JFU10_RS17725 - 3533185..3533640 (+) 456 WP_071391903.1 flavodoxin -
  JFU10_RS17730 dapD 3533722..3534432 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  JFU10_RS17735 - 3534503..3535627 (+) 1125 WP_071391902.1 N-acetyldiaminopimelate deacetylase -
  JFU10_RS17740 - 3535688..3535933 (+) 246 WP_003154596.1 YkuS family protein -
  JFU10_RS17745 - 3535967..3536773 (-) 807 WP_060386912.1 mechanosensitive ion channel family protein -
  JFU10_RS17750 - 3537060..3537518 (+) 459 WP_071391901.1 redoxin domain-containing protein -
  JFU10_RS17755 rok 3537970..3538566 (+) 597 WP_070081746.1 transcriptional regulator Rok Regulator
  JFU10_RS17760 - 3538587..3539579 (-) 993 WP_069473386.1 sporulation protein -
  JFU10_RS17765 - 3539725..3540327 (+) 603 WP_071391898.1 molybdenum cofactor guanylyltransferase -
  JFU10_RS17770 - 3540379..3541398 (+) 1020 WP_071391897.1 molybdopterin-synthase adenylyltransferase MoeB -
  JFU10_RS17775 glp 3541416..3542708 (+) 1293 WP_071391896.1 gephyrin-like molybdotransferase Glp -
  JFU10_RS17780 mobB 3542669..3543190 (+) 522 WP_041482361.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22583.61 Da        Isoelectric Point: 9.6909

>NTDB_id=519357 JFU10_RS17755 WP_070081746.1 3537970..3538566(+) (rok) [Bacillus velezensis strain Mr12]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKNDSLPVLAELAAQEMRSYQKPQ
TQPQSSQQQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=519357 JFU10_RS17755 WP_070081746.1 3537970..3538566(+) (rok) [Bacillus velezensis strain Mr12]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAATGACTCCCTCCCGGTACTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCAGCAGATGCAGTCTATTACGTCTCTTCCCGCAGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCGAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

87.629

97.98

0.859