Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   JFU10_RS02965 Genome accession   NZ_CP066337
Coordinates   713137..713937 (-) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain Mr12     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 708137..718937
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JFU10_RS02935 - 708686..709318 (+) 633 WP_071391633.1 helix-turn-helix domain-containing protein -
  JFU10_RS02940 - 709609..709746 (+) 138 WP_014470646.1 hypothetical protein -
  JFU10_RS02945 - 709840..710958 (+) 1119 WP_198863797.1 NADH-dependent flavin oxidoreductase -
  JFU10_RS02950 - 711085..711297 (+) 213 WP_003153183.1 spore germination protein -
  JFU10_RS02955 - 711424..711636 (+) 213 WP_003153181.1 spore germination protein -
  JFU10_RS02960 alr 711812..712993 (+) 1182 WP_102421903.1 alanine racemase -
  JFU10_RS02965 spo0A 713137..713937 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  JFU10_RS02970 spoIVB 714218..715498 (-) 1281 WP_198863798.1 SpoIVB peptidase -
  JFU10_RS02975 recN 715662..717392 (-) 1731 WP_077722583.1 DNA repair protein RecN Machinery gene
  JFU10_RS02980 ahrC 717424..717873 (-) 450 WP_003153173.1 transcriptional regulator AhrC/ArgR -
  JFU10_RS02985 - 717968..718813 (-) 846 WP_003153172.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=519291 JFU10_RS02965 WP_003153177.1 713137..713937(-) (spo0A) [Bacillus velezensis strain Mr12]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=519291 JFU10_RS02965 WP_003153177.1 713137..713937(-) (spo0A) [Bacillus velezensis strain Mr12]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCCGATGTGCTCG
TTTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGGGAATCAGAGCTCGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCCGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAACCAACCAATTCAGAGTTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97