Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   KZ795_RS15890 Genome accession   NZ_CP080286
Coordinates   3438613..3439227 (-) Length   204 a.a.
NCBI ID   WP_003091196.1    Uniprot ID   Q02PH1
Organism   Pseudomonas aeruginosa strain UNC_PaerCF12     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3433613..3444227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZ795_RS15865 (KZ795_15865) - 3434074..3434337 (+) 264 WP_033968913.1 DUF1653 domain-containing protein -
  KZ795_RS15870 (KZ795_15870) topA 3434428..3437034 (+) 2607 WP_003091201.1 type I DNA topoisomerase -
  KZ795_RS15875 (KZ795_15875) - 3437141..3437659 (+) 519 WP_033968911.1 DUF6586 family protein -
  KZ795_RS15880 (KZ795_15880) - 3437865..3438098 (+) 234 WP_003109483.1 hypothetical protein -
  KZ795_RS15885 (KZ795_15885) sulA 3438119..3438601 (-) 483 WP_033968910.1 SOS-induced cell division inhibitor SulA -
  KZ795_RS15890 (KZ795_15890) dinR/lexA 3438613..3439227 (-) 615 WP_003091196.1 transcriptional repressor LexA Regulator
  KZ795_RS15895 (KZ795_15895) psrA 3439459..3440160 (+) 702 WP_003091195.1 transcriptional regulator PsrA -
  KZ795_RS15900 (KZ795_15900) nagZ 3440362..3441360 (+) 999 WP_033968908.1 beta-N-acetylhexosaminidase -
  KZ795_RS15905 (KZ795_15905) - 3441372..3442109 (+) 738 WP_039027693.1 S-methyl-5'-thioinosine phosphorylase -
  KZ795_RS15910 (KZ795_15910) - 3442154..3442786 (-) 633 WP_110193707.1 CsiV family protein -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 22505.95 Da        Isoelectric Point: 6.4989

>NTDB_id=519191 KZ795_RS15890 WP_003091196.1 3438613..3439227(-) (dinR/lexA) [Pseudomonas aeruginosa strain UNC_PaerCF12]
MQKLTPRQAEILSFIKRCLEDHGFPPTRAEIAQELGFKSPNAAEEHLKALARKGAIEMTPGASRGIRIPGFEPHAANDDE
GLPVIGRVAAGAPILAEQNIEESCRINPAFFNPRADYLLRVRGMSMKDIGILDGDLLAVHVTREARNGQVVVARIGEEVT
VKRFKREGSKVWLLAENPEFAPIEVDLKEQELIIEGLSVGVIRR

Nucleotide


Download         Length: 615 bp        

>NTDB_id=519191 KZ795_RS15890 WP_003091196.1 3438613..3439227(-) (dinR/lexA) [Pseudomonas aeruginosa strain UNC_PaerCF12]
ATGCAGAAGCTGACGCCCCGCCAAGCCGAGATCCTCTCCTTCATCAAGCGCTGCCTGGAAGACCACGGCTTTCCGCCGAC
CCGGGCGGAAATCGCCCAGGAACTCGGCTTCAAGTCGCCGAACGCCGCCGAGGAGCACCTCAAGGCGCTCGCGCGCAAGG
GTGCCATCGAAATGACTCCGGGCGCCTCTCGCGGCATCCGCATTCCCGGCTTCGAACCGCATGCCGCCAACGACGATGAG
GGCCTGCCGGTGATCGGACGTGTCGCCGCCGGCGCACCGATCCTCGCCGAACAGAACATCGAGGAATCCTGCCGGATCAA
TCCCGCCTTCTTCAATCCTCGCGCCGACTACCTGTTGCGCGTGCGCGGCATGAGCATGAAGGACATCGGCATCCTCGACG
GCGACCTGCTGGCCGTCCACGTCACCCGCGAAGCGCGCAACGGCCAGGTGGTAGTCGCGCGGATCGGCGAGGAGGTCACA
GTGAAACGTTTCAAGCGCGAAGGCAGCAAGGTCTGGCTGCTGGCGGAAAACCCTGAGTTCGCTCCGATCGAAGTCGATCT
GAAGGAGCAGGAACTGATCATCGAAGGCTTGAGCGTCGGCGTGATCCGGCGCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(83-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q02PH1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

38.35

100

0.387